 |
Simple sequence repeat (SSR)
>UN09961
CGAAATTGAAATTGGAATTGGAAACTCAAATCTCGAATTTTTGTTTCTGAAAACCCTAAACAGTTCCGATCGGCTATGACTTACGCATCTCGTA
TCATCATTCATTCCAAGAAGCTTAAACATGTCTCCACTTTACTGCGGCGTGACCATGCTGTGGCAGTCCGCGGCTTCTCCAACAACAGTTCTCT
CACTGCAAGACAAGATATGCTCAAGACTACTCGTCTGTCTTATTCCCCGTTACAGAGGATTTCGAAATGTCATGCCAGCACTGTACCAATGCCT
AGTGGTATTTCAACAATGACAGGGCCATCATTTTCTAGAGAGTATATGAGCTCCCAGATGCGATCAGTACGAGGGTTTTCATCTGGTTCAGATC
TTCCTCCTCACCAAGAGATCGGAATGCCTTCTCTTTCGCCAACAATGACCGAGGGTAACATTGCCAGGTGGCTGAAGAAGAAGGTGATAAAGTC
GCTCCCGGTGAAGTGCTTTGCGAAGTTGAAACTGACAAAGCAACCGTTGAAATGGAATGCATGGAAGAGGGTTATCTCGCTAGGATACTAAAGG
AGGAGGGGGCAAAAGCAATTCAAGTTGGGGAGGTGATTGCTATCACAGTGGAAGAGGAAGAAGATATTCAAAAGTTTAAAGATTACACCCCATC
ATCTGATACTAGTCCCGCTGCTCCTGAAGCAAAACCAACTCCTTCCCCACCAAAGGAAGAGAAGGTCGAGAAGCCAGCCAGTGCTCCTGAAGCC
AAGACTTCCAGCCAAGCTCTGCTCCTTCAGAAGATCGTATTTCTGCTAGTCCTCTTGCAAAAAAGCTGGCTGAGGATAATAGTGTACCGCTTTC
AAGCATCAAAGGAACAGGTCCTGAAGGACGGATAGTGAAGGCTGATGTCGAAGAGTTCTTAGCTTCACGCGGAAAAGAAACTACTGCCAAGCCT
CCCAAGCCCACCGATTCAAAGGTTCCAGCTCTGGACTATGTCGACATCCCTCACACTCAGATACGAAAGGTCACAGCCTCACGTTTGGCATTCT
CAAAGCAAACTATTCCCCACTACTACTTGACCGTGGATACACGTGTTGACAAATTGATGGGTCTTAGGAGTCAACTGAATTCATTTCAAGAGGC
TTCAGGCGGGAAACGTATATCTGTAAATGATCTTGTTATTAAGGCTGCTGCATTGGCTCTACGGAAAGTTCCTCAGTGCAATAGTTCATGAACA
GACGAATACATCCGCCAATTTAGCAATGTGAACATCAATGTCGCAGTACAAACAGAAAATGGGCTTTACGTTCCTGTTGTCAAGGACGCTGACA
AGAAAGGGCTGTCTACAATTGGAGAAGAGGTTCGGTTCTTGGCTCAGAAGGCTACAGAAAACAGCTTGAAGCCTGAAGATTACGAGGGAGGAAC
ATTCACAGTTTCCAACCTGGGAGGACCTTTTGGCATCAAACAGTTCTGCGCTGTCATCAATCCACCTCAAGCTGCTATTCTAGCCATCGGATCT
GCTGAGAAGAGAGTTGTTACTGGTAGTGGTCCTGACCAATACAACGTTGCTTTCTACATGTCTGTAACACTTAGCTGTGACCACCGTGTAATAG
ATGGTGCCATTGGAGCTGAATGGTTGAAAGCATTCAAGGGCTACATCGAGACCCCAGAGTCTATGTTGCTCTAAACTCCACACACACACACACG
TCAAAGCTAAAGCTCATAAGAGCATGACATGAAATTTCTCTGGTTTAACAGTTCCTTCCAGATTTGTTCCCTTTAGCCATGTGCATGCCTTCCA
AAGTTTGCTTGCTCTTGCCATTCTTTACGTTGAGTTGACAAGTTTGCTTGCTCTTGCCATTCTTTACGTTGAGTTGACAGATTTTTTTATCTCA
AAATAAAATCAGGAATCCAACAAGTTGACTGTTAAATGTATTGTTGGTTTCATCATGGGATGGCATCACAATATAACCGATTTATTATTTGTTA
ATTATAACTAGAGATGAATGTTTAATACCATCTTAGAGCATCTCTACATATAATATAAGATCACACATTTTAGTGGTTAGTATGATGGTTAGTT
GTTGAAACACATACAAAATCGCGAAATATATAAAAAACAACTAGCCTCAAAATTTTGATGCAAATAATTTTTTTCCCTCAAGGATAGTACGATT
TAGTTTGGCAAATCTTTTGTTATACTCCGTAGTTATACTATTTAACAATGTTACTAATCGAATTATTTATAAACCCAGACATGTTTTAGGAAAC
ACTAAATTTTGAAGGTTATATCAAACTTATTTTATGT |
Primers for UN09961 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATAGATGGTGCCATTGGAGC |
59.923 |
20 |
ATGGCAAGAGCAAGCAAACT |
60.022 |
20 |
213 |
1595 |
1807 |
| 2 |
ATAGATGGTGCCATTGGAGC |
59.923 |
20 |
ATGGCAAGAGCAAGCAAACT |
60.022 |
20 |
252 |
1595 |
1846 |
| 3 |
GCTACATCGAGACCCCAGAG |
59.827 |
20 |
ATGGCAAGAGCAAGCAAACT |
60.022 |
20 |
170 |
1638 |
1807 |
|
|
