 |
Simple sequence repeat (SSR)
>UN01558
TTTTTATGTTCGGTTTTGTTTTCCTCTTTCCTCTTTCCTCTTGAAGAAGAACCCTAAAACCCATCCCCCGCGCATCCCCGATCTGATAGAGAGA
AGAATCGATAATCGAAGAATATTATATTTGTTTAATCCAATTTCATCTGGTGTAGCTTCTTCGCTCAAACCTACGTGAACAACGATACGATGGC
TACGCCAATGGTTGCAGGTGCTGCAGTAGCTGCTGCTGCTATAGCTGGTAGATACGGTATACTCGCTTGGCAAGCTTTCATGGCCAGGCCCATC
GTTCCTAGAATGCGCAGGTTCTATGAAGGTGGTTTCCAAGCTGCCATGACACGGCGCGAAGCTGCTCTCATTCTTGGTGTTAGGGAGAGGGTAG
TGGCGGAGAAGGTGAAAGAAGCTCACAGGAGAGTGATGGTAGCAAACCACCCTGACGCTGGAGGTAGTCACTATCTTGCTTCTAAGATCAATGA
AGCCAGAGATATCATGCTTGGCAAATCCAATAACTCTGGCTCTGCTTTTTTATTCTCTCTCTCTCATTTTTGAGTGTTTAATACAAATCATCCC
CCCCCCCAACAGGCAAAACTCTTTCTTGTCTCTTCATTTTGAATGTGCTACCAATTTCTTGTTGTATATCATTATTATCTTCCCAAAGAAGAAG
GTGATCAATATTTGTTATATGATACAAACACCTTAGCCTGTGTAATCAGACACATGTACTGAATAAAAAAAGAAATTGATC |
Primers for UN01558 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TATCATGCTTGGCAAATCCA |
60.035 |
20 |
AAAGAGTTTTGCCTGTTGGG |
59.215 |
20 |
109 |
480 |
588 |
| 2 |
GCGAAGCTGCTCTCATTCTT |
59.866 |
20 |
AAAGAGTTTTGCCTGTTGGG |
59.215 |
20 |
251 |
338 |
588 |
| 3 |
GTGATGGTAGCAAACCACCC |
60.24 |
20 |
AAAGAGTTTTGCCTGTTGGG |
59.215 |
20 |
180 |
409 |
588 |
|
|
