 |
Simple sequence repeat (SSR)
>UN18342
ATCAAAAAATTAGTTTTCAGTTCTTTTATAAAATATTATTGCAAAATACATAAGCAACCAAATGAAAACATAAGACTTTGTTCTTGTTTGCGTT
TTATGTTTATAAATTAACAAATGAACTTTGTTTAAAAACCATACTTTTAAAAAGAAAATATGCAAACACAAACGCAAACCATGGTTCAAGATTC
CAACATACTTAGAGCTGCTGTTTCAGTCAGCGCTTGACGATACCTCATTAGAATCAGGAGGAGGCACATCTTCCTCCTCGCTATCATCATCATC
ATCACTATTTTCTTCTCCACTCACGCCTTCACTAACCATCGGACCTAGAAGGAAGCCGATAGACTCGATATTGACCAGAAACTGAGGAACCTGA
GCGAGCTCAAGCCTGTGGTCTGGGGTGTGTTGTTGGTTGAATCTCCCTGGAACTTTCGAAGGAGTCTCGTAACAGTCTTTGCATAGGTCATAAC
CAATCTCTTCCTTGCAGTCTTTGCATCTGTATCGCTCCCCTATGATTGGATACACTCCGCAACAATCACAACCAGCTCCGATGTGAACATTAGA
CGCAGGGTTCGCCCACCAGGGAAGGTCATTGTTGTTCTCGCCTGATACGGATGGGCCTTCTTTGTGAGAGCTTTGACTGTTTCCTTTGCTAGTC
TGGGGAATCGATTTCTGAATCCCACTTCTCCTTGAATTGTATTCTTGAGGAAAGTTCTCCTCCAGAAGCTGCTCAAGAACCAAACAAACTTTAG
GAAACCCTCTCGGGTCAGAGATATGACAGTCTAGACATTTGATCTTTTCGCCTTCTTGAAACATATCTACTACACATCCTTCACAATACACATG
TCCGCAGTTGAGAACAACGGGTCGCACAAGCAGCTCCTTACATGCAGAACAGAGCAAATCATCTTTCGAAATTTGCTTACTGACTTTATTATTA
GAGCACTCTTCCACCTTCTGCTCATCTCCACTAGATACAGACTCTTCCTTAGCCTTTGGTTCATCAATCTGAGGTGAAAAGCATTCTAGTTCTT
GTTCCTCCTTTAGAACTTGTTCTTCTCTCTTGTGGTGGGCAAGAGGGTAAATCTTCTTGAGGAGGAAGTGGAGCTTTTGGCAGACAGCAGGAAA
GTGAACATAAGGGTCTCTACAAATGGGACAATGAGACTCACGCAGCTCGTTCATTGACTTGTGTACGCACCAGAAACACGATAGGTGACCACAT
GATAGCACAATCGGTTTGTAAAGAAGTTCCAGGCAGACGCAGCAGAGAAACTTGTCGGAGATTTCTTCGTGTAGCTCAGCGTTCTTCATTGTAA
CATCCTCCATAGGTAGGGAGAGATTGGGGATTGAGAAATCAAAACTTTCTGCAAAATTATCAAAACAGGAAAATAGAGAGAGAGAGAGAGAGAT
CTGAGATTTCGACGGTGCGGTCC |
Primers for UN18342 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCACATGATAGCACAATCGG |
59.948 |
20 |
ACCGCACCGTCGAAATCT |
61.645 |
18 |
215 |
1217 |
1431 |
| 2 |
AGGTAGGGAGAGATTGGGGA |
59.89 |
20 |
ACCGCACCGTCGAAATCT |
61.645 |
18 |
105 |
1327 |
1431 |
| 3 |
GTGTACGCACCAGAAACACG |
60.222 |
20 |
ACCGCACCGTCGAAATCT |
61.645 |
18 |
243 |
1189 |
1431 |
|
|
