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Simple sequence repeat (SSR)
>UN43359
AGGAGAATAAATCTTTTATATTACAGTTGATAATGGATCACAGGTTTCATTCCTTGATTACAAGCATCCAACGTGCTCTCTAAACACTTTCCAG
CAAGATCATTAACCCATCATTTATTACATAACAAACCCCACTTAATTATATATCCAACTATACCCCCTCTTTCTTTCTTTTTTCTCATTTCTCC
TTCTACATATCTGTCTACTATAACATTAATGAGTTTTGGCATTTTAAAATAAAAAGGAAAAATACAGAAATATGTATCTGTAATCATTTTTTTT
GTAAAATGAAATAAACGAGCATGTGATGATAATGAAGCAGAGAGAGAGAGTGAGGTCATTAAGTGGAATCATCAGCGTGAGAGTTTTCCTTTTT
TACCCTCGGCTGTATCCCATAATAACCAACGTACCACTTGACGAACTTCCTCAACCCCGTCGCGAGCTCCGTCGTTGGTTTATACCCGAAGTCT
CTATACGCTAAGCTCACATTCGCATGCGTGTAAGGCACGTCACCGTTTCTCGGCATTTTGATCAGATGCTTCATCGTCTTGCTTGTATCCACTG
TCGTAGCCGATAAGGGCATTTTAGTATTTTGAGTTGGAATTCTTACTGATCTAGATTTGTCAGTGGATTCTTCTCCCTGCATCCAAGAAGGGGC
TCGACGAAAAATGTTAAGATTATTTTTCTAAGGGATGACTCTAAGGGTTTGAGAGAGTTTGAGCCCTCC |
Primers for UN43359 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCAGCAAGATCATTAACCCA |
58.572 |
20 |
CTCTCACGCTGATGATTCCA |
59.942 |
20 |
275 |
91 |
365 |
| 2 |
TCCAGCAAGATCATTAACCCA |
60.454 |
21 |
CTCTCACGCTGATGATTCCA |
59.942 |
20 |
276 |
90 |
365 |
| 3 |
CCAGCAAGATCATTAACCCA |
58.572 |
20 |
TCTCACGCTGATGATTCCAC |
59.794 |
20 |
274 |
91 |
364 |
|
|
