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Simple sequence repeat (SSR)
>UN48040
GGCATCACGAAACTCGTCAACGACACTTTGGCTACTGAGCATCTACTACCCAAAGCCACCGACTCTACTACTTTATCCACAGATGATCTACTCA
GAGCCATTGACTGTGGCACATCCGAAGGTGGTCCTATTGGCCGACACTGGGTCTTGGATCCTATTGATGGCACCAAAGGATTTTTGAGGGGAGA
TCAGTACGCGGTAGCACTAGGATTGCTTGAGGAAGGGAAAGTAGTTTTAGGTGTCCTTGCTTGTCCAAACTTGCCATTAGCTTCCATAGCAGGC
AACAACAAGAACAAGAACTCTTCTTCTTCTTCTTCAGACGAAACCGGATGCCTCTTCTTTGCTACGATTGGTTCAGGGACGTGCGTGCAGCCCT
TGGACTCGAACTCCGAACCAGTCAAAGTACATGTGTCGAGCGTTGAGAATCCGGAAGAGGCATCCTTCTTCGAGTCATTTGAAGGAGCTCACTC
TCTTCACGACTTATCCAGTTCCATTGCCAATAAACTCGGTGTGAAAGCGCCGCCTGTTAGGATAGATAGCCAAGCGAAGTATGGAGCTTTGTCT
AGAGGAGATGGAGCTATATACTTACGGTTTCCTCATAAAGGATACCGTGAAAAGATTTGGGACCATGTCGCTGGTGCTATTGTTGTTACAGAGG
CGGGTGGAATCGTGACGGATGCAGCGGGAAAGCCACTGGATTTCTCGAAAGGGAAGTATCTTGATTTGGACACAGGCATCATCGTTGCTAATGA
GAAGCTTATGCCTTTGCTTTTGAAAGCTGTTCGTGACTCCATTGCTGAGCAAGAGAATGCTTCTTCTTCATCTTTCTGATTCTTTCTCTCTTTT
GTGTGTCTTTGTATTTGCTATAACTCTTCCTTTCACCACCACTACAACTAAACATGTTTCATTACACAGTTAGAGTTTCTTCGATTTTCTATTT
AAATAAGAAAAAACATGATGTTACAGAGCC |
Primers for UN48040 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCAGGCAACAACAAGAACAA |
59.888 |
20 |
GATTCTCAACGCTCGACACA |
59.992 |
20 |
151 |
277 |
427 |
| 2 |
GCTTGTCCAAACTTGCCATT |
60.118 |
20 |
GATTCTCAACGCTCGACACA |
59.992 |
20 |
181 |
247 |
427 |
| 3 |
GGAGATCAGTACGCGGTAGC |
59.866 |
20 |
GATTCTCAACGCTCGACACA |
59.992 |
20 |
244 |
184 |
427 |
|
|
