 |
Simple sequence repeat (SSR)
>UN50665
ATTAAAACTCGTCTGTTAAAAGTACAAAAAGGTTTCCAGCAGTCTTAAAAAAAAGCATTAAGAGACTAGTCTAATAGAGGAAGTACAACAACAA
CACACCAAGAACTCATCCCTTTCTCTTACTTAAAATCCCACTTGGCCTCACTTCAAATGACCCACCAAGGCTGCATTTGATGCTAGACTCTTTT
TTTTTGTCTCTACCAATAAATCTTGATCATTTTTCTTTAAAGATGAGGTCACAATAAAACACAAAGACTCTTATTCAATTTCTTCTTCTTTTGA
TTCGGTGGCTGAAGCCCCATTTTTATAGCTGCGTCAAAAACTGCTTTAACGTTCTGCTGAGTCTTTGAACTACACTCAATGTAAACCGGAGATC
CTATCAGTTTCTTTAGTTCTTCTCCCTGGTTTGTAGTAATCGGCACTGCACCAGGATGGTCTATGAAGAACTGCTTGTCATCTCGAAGATCGAG
TTTTGTTCCAACGAGGATAATAGGAACTCCAGGGGCATAATGCCTGAGCTCAGGAATCCACTTCTTGGCTATGTTCTCGTAGCTAGCTTTGCTA
ATAAGAGAGAAAGCAAGAATGAAGACATCTGCACCACGGTAACTCAATGGTCTTAACCTGTTATAGTCTTCTTGACCGGCTGTATCCCACAATC
CAAGATTCACAGTGTTCCCATCTACAACGACATTAGCACTGAAGTTGTCGAAAACAGTTGGAACATAGTCCGTAGGGAAAGTGTTGCTGGTGTA
AGAAATCAGCATACATGTTTTTCCGACAGCACCATCGCCGACTGTGACACACTTTATGAACCTCGAAGCGCTCATCTCCGCCGCAAATTTCAAA
ATAAAAAAGGGACAAATGAAAGTCTTCTTCTTCTTCTTCCTCAAATCTCAGCCATTACCAAAAATCAAGATACAACCTTTCCCCTAACTGACAC
ACTAGTTTCTTTCTTTAAGAATTGATTCTTTAATCCACTAATGACCATGTATAGTATGAAAATTCCAAAAGCAAGATGACAGGAAATAAATTGA
TATTATGATTTTTTTGTTCCC |
Primers for UN50665 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGCCGCAAATTTCAAAATAA |
60.904 |
20 |
TCCTGTCATCTTGCTTTTGG |
58.847 |
20 |
194 |
831 |
1024 |
| 2 |
CGCCGCAAATTTCAAAATAA |
60.904 |
20 |
TTCCTGTCATCTTGCTTTTGG |
60.234 |
21 |
195 |
831 |
1025 |
| 3 |
TCCGTAGGGAAAGTGTTGCT |
59.734 |
20 |
TGTCAGTTAGGGGAAAGGTTG |
59.084 |
21 |
213 |
727 |
939 |
|
|
