BLASTX 7.6.2
Query= UN15785 /QuerySize=865
(864 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ASV6|RR20_ARATH 30S ribosomal protein S20, chloroplastic OS... 293 1e-078
sp|B7JWV1|RS20_CYAP8 30S ribosomal protein S20 OS=Cyanothece sp.... 78 8e-014
sp|Q8DJN4|RS20_THEEB 30S ribosomal protein S20 OS=Thermosynechoc... 75 7e-013
sp|B1WZT9|RS20_CYAA5 30S ribosomal protein S20 OS=Cyanothece sp.... 74 1e-012
sp|Q8YWL3|RS20_ANASP 30S ribosomal protein S20 OS=Anabaena sp. (... 70 2e-011
sp|Q3M5D2|RS20_ANAVT 30S ribosomal protein S20 OS=Anabaena varia... 70 2e-011
sp|B7KG02|RS20_CYAP7 30S ribosomal protein S20 OS=Cyanothece sp.... 70 2e-011
sp|P73336|RS20_SYNY3 30S ribosomal protein S20 OS=Synechocystis ... 70 2e-011
sp|B0JGK4|RS20_MICAN 30S ribosomal protein S20 OS=Microcystis ae... 66 2e-010
sp|B0C2C8|RS20_ACAM1 30S ribosomal protein S20 OS=Acaryochloris ... 66 3e-010
sp|Q1XDN4|RR20_PORYE 30S ribosomal protein S20, chloroplastic OS... 64 2e-009
sp|Q2JVV4|RS20_SYNJA 30S ribosomal protein S20 OS=Synechococcus ... 63 2e-009
sp|Q3AZA6|RS20_SYNS9 30S ribosomal protein S20 OS=Synechococcus ... 63 3e-009
sp|Q31N19|RS20_SYNE7 30S ribosomal protein S20 OS=Synechococcus ... 62 3e-009
sp|Q5MZ25|RS20_SYNP6 30S ribosomal protein S20 OS=Synechococcus ... 62 3e-009
sp|Q2JI48|RS20_SYNJB 30S ribosomal protein S20 OS=Synechococcus ... 62 5e-009
sp|P51253|RR20_PORPU 30S ribosomal protein S20, chloroplastic OS... 60 2e-008
sp|Q7NP97|RS20_GLOVI 30S ribosomal protein S20 OS=Gloeobacter vi... 55 4e-007
>sp|Q9ASV6|RR20_ARATH 30S ribosomal protein S20, chloroplastic OS=Arabidopsis
thaliana GN=RPS20 PE=1 SV=1
Length = 202
Score = 293 bits (749), Expect = 1e-078
Identities = 166/204 (81%), Positives = 174/204 (85%), Gaps = 16/204 (7%)
Frame = +3
Query: 87 MATLVQCLSSCATLNPKFKSLSLNG-----ASSSLSTRRG----VCSSLSFSQSVSQCVA 239
MAT+VQCLSSCATL +FK LSL G SSS S RRG + SSLSFSQSVSQCVA
Sbjct: 1 MATIVQCLSSCATLESQFKVLSLKGISCSSPSSSFSNRRGASATLSSSLSFSQSVSQCVA 60
Query: 240 FSSGNMWVEKNKPARQSIVCE-AAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRMKKV 416
FS+GN+WV+ KP RQ IVCE AAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRMKKV
Sbjct: 61 FSTGNLWVQ--KPMRQLIVCEAAAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRMKKV 118
Query: 417 LEALDGLKKKTDAVPDEIVTVEKLIGEAYSAIDKAVKVRALHKNTGARRKSRLARRKKAV 596
LEAL+GLKKKTDA DEIVTVEKLIGEAYSAIDKAVKV+ALHKNTGARRKSRLARRKKAV
Sbjct: 119 LEALEGLKKKTDAQADEIVTVEKLIGEAYSAIDKAVKVKALHKNTGARRKSRLARRKKAV 178
Query: 597 EIHHGWYVPAAAA----EAVTMAA 656
EIHHGWYVP AAA EAV MAA
Sbjct: 179 EIHHGWYVPDAAAAAPSEAVPMAA 202
>sp|B7JWV1|RS20_CYAP8 30S ribosomal protein S20 OS=Cyanothece sp. (strain PCC
8801) GN=rpsT PE=3 SV=1
Length = 97
Score = 78 bits (190), Expect = 8e-014
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYS 506
SA KR AE+ R++NK+ KS RT MKK EA+ + PD + VE+ + AYS
Sbjct: 6 SALKRIAVAERNRLHNKAYKSAVRTLMKKYFEAVQAY--GNNPTPDNLSVVEQCMSAAYS 63
Query: 507 AIDKAVKVRALHKNTGARRKSRLARRKKAV 596
IDKAVK LH+N GAR+K+RLA+ K V
Sbjct: 64 KIDKAVKRHVLHRNNGARKKARLAKALKQV 93
>sp|Q8DJN4|RS20_THEEB 30S ribosomal protein S20 OS=Thermosynechococcus elongatus
(strain BP-1) GN=rpsT PE=3 SV=1
Length = 98
Score = 75 bits (182), Expect = 7e-013
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYS 506
SAAKRA+ AE+ R+ NK+ +S RT +K L A+ + TD P+++ V + A+S
Sbjct: 6 SAAKRAQIAERNRLRNKAYRSAVRTLIKNYLNAIS--QYSTDPTPEKLAEVHHRLNLAFS 63
Query: 507 AIDKAVKVRALHKNTGARRKSRLAR 581
IDKAVK LH+NTGARRK+RL R
Sbjct: 64 KIDKAVKRGVLHRNTGARRKARLTR 88
>sp|B1WZT9|RS20_CYAA5 30S ribosomal protein S20 OS=Cyanothece sp. (strain ATCC
51142) GN=rpsT PE=3 SV=1
Length = 97
Score = 74 bits (180), Expect = 1e-012
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYS 506
SA KR R +E+ R+ NKS KS RT MKK L+A++ + P+ V++ + AYS
Sbjct: 6 SALKRIRTSERNRLRNKSYKSAVRTLMKKYLQAVE--EYAASPTPENKAVVDQRMSAAYS 63
Query: 507 AIDKAVKVRALHKNTGARRKSRLARRKKAV 596
IDKAVK LH+N GAR+K+RLA+ + V
Sbjct: 64 KIDKAVKRSVLHRNNGARKKARLAKALQQV 93
>sp|Q8YWL3|RS20_ANASP 30S ribosomal protein S20 OS=Anabaena sp. (strain PCC
7120) GN=rpsT PE=3 SV=1
Length = 97
Score = 70 bits (170), Expect = 2e-011
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYS 506
SA KRA+ AE+ RV NK+ KS +T MK L A+ + P+ + + AYS
Sbjct: 6 SALKRAQIAERNRVRNKTYKSSVKTLMKNYLSAVQAY--AANPTPESKQEAQTRLAAAYS 63
Query: 507 AIDKAVKVRALHKNTGARRKSRLARRKKAVE 599
IDKAVK LH N GAR+KSRLA + K +E
Sbjct: 64 RIDKAVKRGILHPNNGARKKSRLASKLKPIE 94
>sp|Q3M5D2|RS20_ANAVT 30S ribosomal protein S20 OS=Anabaena variabilis (strain
ATCC 29413 / PCC 7937) GN=rpsT PE=3 SV=2
Length = 98
Score = 70 bits (170), Expect = 2e-011
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYS 506
SA KRA+ AE+ RV NK+ KS +T MK L A+ + P+ + + AYS
Sbjct: 7 SALKRAQIAERNRVRNKTYKSSVKTLMKNYLSAVQAY--AANPTPESKQEAQTRLAAAYS 64
Query: 507 AIDKAVKVRALHKNTGARRKSRLARRKKAVE 599
IDKAVK LH N GAR+KSRLA + K +E
Sbjct: 65 RIDKAVKRGILHPNNGARKKSRLASKLKPIE 95
>sp|B7KG02|RS20_CYAP7 30S ribosomal protein S20 OS=Cyanothece sp. (strain PCC
7424) GN=rpsT PE=3 SV=1
Length = 97
Score = 70 bits (170), Expect = 2e-011
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIV--TVEKLIGEA 500
SA KR + AE+ R+ NKS KS +T MKK A++ K A P E V++ + A
Sbjct: 6 SAIKRIQIAERNRLRNKSYKSAVKTLMKKYYAAVEDYK----ANPSEEAKKAVDQAMSAA 61
Query: 501 YSAIDKAVKVRALHKNTGARRKSRLARRKKAV 596
YS IDKAVK R LH+N GAR+KS+LA K V
Sbjct: 62 YSKIDKAVKCRILHRNNGARKKSQLANALKQV 93
>sp|P73336|RS20_SYNY3 30S ribosomal protein S20 OS=Synechocystis sp. (strain PCC
6803) GN=rpsT PE=3 SV=1
Length = 97
Score = 70 bits (169), Expect = 2e-011
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYS 506
SA KR AE+ R+ NKS KS +T MKK ++++ +D P+++ T+ + A+S
Sbjct: 6 SALKRIEIAERNRLQNKSYKSAIKTLMKKTFQSVEAY--ASDPNPEKLDTINTSMAAAFS 63
Query: 507 AIDKAVKVRALHKNTGARRKSRLAR 581
IDKAVK + +HKN AR+K+RLA+
Sbjct: 64 KIDKAVKCKVIHKNNAARKKARLAK 88
>sp|B0JGK4|RS20_MICAN 30S ribosomal protein S20 OS=Microcystis aeruginosa
(strain NIES-843) GN=rpsT PE=3 SV=1
Length = 97
Score = 66 bits (160), Expect = 2e-010
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYS 506
SA KR + +E+ R+ NK+ KS RT +KK L A+ + P+ + + ++ + EAYS
Sbjct: 6 SALKRVQISERNRLRNKAYKSAVRTLIKKCLVAVSAY--GANPSPEGLESAQQALSEAYS 63
Query: 507 AIDKAVKVRALHKNTGARRKSRLARRKKAV 596
IDKAVK LH+N GAR+K+ LA+ + V
Sbjct: 64 KIDKAVKRNVLHRNNGARKKAGLAKALQKV 93
>sp|B0C2C8|RS20_ACAM1 30S ribosomal protein S20 OS=Acaryochloris marina (strain
MBIC 11017) GN=rpsT PE=3 SV=1
Length = 94
Score = 66 bits (159), Expect = 3e-010
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYS 506
SA KR AE+ R+ NK+ KS +T K+ A+D K++ D++ ++ + YS
Sbjct: 6 SAKKRILIAERNRLQNKAYKSAIKTFTKRFQAAVDDY--KSNPSDDQLAAIQNEMSVTYS 63
Query: 507 AIDKAVKVRALHKNTGARRKSRLARRKKA 593
IDKAVKV H+NTGAR+K+ LAR KA
Sbjct: 64 KIDKAVKVGVFHRNTGARKKAGLARILKA 92
>sp|Q1XDN4|RR20_PORYE 30S ribosomal protein S20, chloroplastic OS=Porphyra
yezoensis GN=rps20 PE=3 SV=1
Length = 95
Score = 64 bits (153), Expect = 2e-009
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = +3
Query: 330 AAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYSA 509
A KR + +E+ R+ N+ KS +T K+ L +D L+ D V+ I + YS
Sbjct: 7 AIKRIKTSERNRLINRKYKSVVKTLTKRCLLNIDNLES------DNFNDVQSSISQVYSK 60
Query: 510 IDKAVKVRALHKNTGARRKSRLAR 581
IDKAVK A H NTGAR+K+RLAR
Sbjct: 61 IDKAVKKGAFHPNTGARKKARLAR 84
>sp|Q2JVV4|RS20_SYNJA 30S ribosomal protein S20 OS=Synechococcus sp. (strain
JA-3-3Ab) GN=rpsT PE=3 SV=1
Length = 100
Score = 63 bits (152), Expect = 2e-009
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYS 506
SA KR + AE+ R+ NK+ K+ R MKKV + P+ + ++ + A+S
Sbjct: 6 SAIKRVKIAERNRLRNKATKAMVRALMKKVTSLSSAY--AANPQPETLQEIQAAMSAAFS 63
Query: 507 AIDKAVKVRALHKNTGARRKSRLAR 581
IDKA K LHKNT ARRK+RL+R
Sbjct: 64 RIDKAAKTGVLHKNTAARRKARLSR 88
>sp|Q3AZA6|RS20_SYNS9 30S ribosomal protein S20 OS=Synechococcus sp. (strain
CC9902) GN=rpsT PE=3 SV=1
Length = 98
Score = 63 bits (151), Expect = 3e-009
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Frame = +3
Query: 324 DSAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDE--IVTVEKLIGE 497
+SA KR AE+ R+ N++ KS RT MK+ A D + P E +V+ + E
Sbjct: 5 NSAKKRIEIAERNRLRNRTYKSSMRTLMKRCFSACDAY----GSAPGEEAKASVQASLRE 60
Query: 498 AYSAIDKAVKVRALHKNTGARRKSRLARRKKAV 596
A+S IDKAVKV LH+N GA +KSRL+ + V
Sbjct: 61 AFSKIDKAVKVGVLHRNNGANQKSRLSSAVRKV 93
>sp|Q31N19|RS20_SYNE7 30S ribosomal protein S20 OS=Synechococcus elongatus
(strain PCC 7942) GN=rpsT PE=3 SV=1
Length = 98
Score = 62 bits (150), Expect = 3e-009
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIV--TVEKLIGEA 500
SA KR + AE+ R+ NK+ KS +T +K A D A P+E V + + A
Sbjct: 6 SAIKRVQIAERNRLRNKAYKSAVKTLVKHCFTAFDAYA----ADPNETARQAVNERLSAA 61
Query: 501 YSAIDKAVKVRALHKNTGARRKSRLAR 581
YS IDKAVK LH NTGAR+K+RLA+
Sbjct: 62 YSKIDKAVKRGVLHANTGARKKARLAK 88
>sp|Q5MZ25|RS20_SYNP6 30S ribosomal protein S20 OS=Synechococcus sp. (strain
ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsT PE=3 SV=1
Length = 98
Score = 62 bits (150), Expect = 3e-009
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIV--TVEKLIGEA 500
SA KR + AE+ R+ NK+ KS +T +K A D A P+E V + + A
Sbjct: 6 SAIKRVQIAERNRLRNKAYKSAVKTLVKHCFTAFDAYA----ADPNETARQAVNERLSAA 61
Query: 501 YSAIDKAVKVRALHKNTGARRKSRLAR 581
YS IDKAVK LH NTGAR+K+RLA+
Sbjct: 62 YSKIDKAVKRGVLHANTGARKKARLAK 88
>sp|Q2JI48|RS20_SYNJB 30S ribosomal protein S20 OS=Synechococcus sp. GN=rpsT
PE=3 SV=1
Length = 109
Score = 62 bits (149), Expect = 5e-009
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDE--IVTVEKLIGEA 500
SA KR + AE+ R+ NK+ K+ R MKKV+ L A P + + ++ + A
Sbjct: 6 SAIKRVQIAERNRLRNKATKAMVRALMKKVI----SLSTAYAANPQQETLQEIQAAMSAA 61
Query: 501 YSAIDKAVKVRALHKNTGARRKSRLAR 581
+S IDKA K LHKNT ARRK+RLAR
Sbjct: 62 FSRIDKAAKTGVLHKNTAARRKARLAR 88
>sp|P51253|RR20_PORPU 30S ribosomal protein S20, chloroplastic OS=Porphyra
purpurea GN=rps20 PE=3 SV=1
Length = 94
Score = 60 bits (143), Expect = 2e-008
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = +3
Query: 330 AAKRARQAEKRRVYNKSKKSEARTRMKKVLEALDGLKKKTDAVPDEIVTVEKLIGEAYSA 509
A KR + +E+ R+ N+ KS +T K+ L ++ L+ + V+ I + YS
Sbjct: 7 AIKRIKTSERNRLINRKYKSVVKTLTKRCLMNIENLEN------SNLNDVQLSISQVYSK 60
Query: 510 IDKAVKVRALHKNTGARRKSRLAR 581
IDKA+K A H NTGAR+K+RLAR
Sbjct: 61 IDKAIKKGAFHPNTGARKKARLAR 84
>sp|Q7NP97|RS20_GLOVI 30S ribosomal protein S20 OS=Gloeobacter violaceus GN=rpsT
PE=3 SV=1
Length = 102
Score = 55 bits (132), Expect = 4e-007
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +3
Query: 327 SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEAL-DGLKKKTDAVPDEIVTVEKLIGEAY 503
SA KR AE+ R N + KS +T KK + L + + ++AV + V+ L+ + +
Sbjct: 6 SAIKRVDVAERNRQRNIAYKSMIKTFTKKFMTRLGEYAQSPSEAV---LTEVQALLNQTF 62
Query: 504 SAIDKAVKVRALHKNTGARRKSRL 575
S IDKA+K +H NTGAR+KSRL
Sbjct: 63 SRIDKAIKAGVIHTNTGARKKSRL 86
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,834,329,955
Number of Sequences: 518415
Number of Extensions: 63834329955
Number of Successful Extensions: 437743986
Number of sequences better than 0.0: 0
|
