Information for unigene UN02685
| FASTA Sequence |
| Unigene ID: UN02685 | Length: 706 |
SSR | | GGACCATTATTCCGGCGAGAGAGAGAGAGCAAAAAAAAAATGGACAACTCAGCACCGGACTCTCTACCTAGATCCGAAACCGCCGT
CACCTACGAATCTCCCTACCCTCTCTACGCCATGTCCTTCTCCTCCTCCTCCTCCTCCACCACAACCCACCGAATCGCCGTCGGAA
GCTTCCTCGAGGACTACAACAACCGCATCGACATCCTCTCCTTCGATCCCGACTCCATGTCCGTCAAACCCCTCCCTTCCCTCTCC
TTCGACCACCCCTACCCTCCCACCAAGCTCATGTTCATCCCTCCCTCCCTCCGCCGCGACCTCCTCGCCTCCTCCGGCGACTTCCT
CCGCCTCTGGGAGATCACCGACTCCTCCTCAACCACCGAGCCCCTCTCGGTCCTCAACAACAGCAAGACGTCCGAGTTCTGCGCCC
CGCTGACCTCCTTCGACTGGAACGACGTCGAGCCGAAACGCCTCGGCACGTGCAGCATCGACACCACGTGCACCATCTGGGACGTG
GAGCGGTCCGTGGTCGAGACGCAGCTCATCGCGCACGACAAGGAGGTCCACGACATCGCCTGGGGGGAAGCCAGGGTCTTCGCCTC
CGTCTCCGCCGACGGATCCGTGCGTATCTTCGATCTCCGCGACAAGGAGCACTCCACCATCATCTACGAGAGCCCCCAGCCCGACA
CGCCTCTCCTGAGCTCGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABP04011 transparent testa glabra 1 isoform 1 [Brassica napus] | 1043 | 1e-111 |
| ABP04014 transparent testa glabra 1 isoform 2 [Brassica napus] | 1043 | 1e-111 |
| ADP38078 WD40 transcription regulator [Brassica oleracea var. botrytis] | 1043 | 1e-111 |
| ADK11704 transparent testa glabra 1 [Brassica rapa subsp. rapa] | 1040 | 3e-111 |
| ABY59776 WD-repeat regulatory factor [Brassica napus] | 1039 | 4e-111 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XGN1 Protein TRANSPARENT TESTA GLABRA 1 | 1035 | 6e-112 |
| Q9LPV9 WD repeat-containing protein LWD1 | 677 | 2e-070 |
| Q38960 WD repeat-containing protein LWD2 | 660 | 2e-068 |
| Q552R1 DDB1- and CUL4-associated factor 7 homolog | 529 | 3e-053 |
| P61962 DDB1- and CUL4-associated factor 7 | 370 | 8e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5HB99 WD-like protein | 1043 | 1e-111 |
| A9XCN4 Transparent testa glabra 1 isoform 1 | 1043 | 1e-111 |
| A9XCN7 Transparent testa glabra 1 isoform 2 | 1043 | 1e-111 |
| B6RFA5 WD-repeat regulatory factor | 1039 | 3e-111 |
| B6RFA4 WD-repeat regulatory factor | 1036 | 7e-111 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G24520.1 TTG1 (TRANSPARENT TESTA GLABRA 1); DNA binding / nucleotide binding / protein binding | 1035 | 6e-113 |
| AT5G24520.3 TTG1 (TRANSPARENT TESTA GLABRA 1); DNA binding / nucleotide binding / protein binding | 1035 | 6e-113 |
| AT5G24520.2 TTG1 (TRANSPARENT TESTA GLABRA 1); DNA binding / nucleotide binding / protein binding | 1035 | 6e-113 |
| AT1G12910.1 ATAN11 (ANTHOCYANIN11); nucleotide binding | 677 | 2e-071 |
| AT3G26640.1 LWD2 (LIGHT-REGULATED WD 2); nucleotide binding | 660 | 2e-069 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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