Information for unigene UN03895
| FASTA Sequence |
| Unigene ID: UN03895 | Length: 1049 |
SSR | | GGGTTTGTTTGTATCCTTCTTCCTCTCTCTCTCTCTCTCTCTCTCCGCCGCATTACGTCTCTCTCTCTCAATCTCTCAGCTTAAGC
GCAGAACCATGGCAGCGAAACAGGGAGCCGCAGCTACAACGTATTCACCAAAAATCATGGCGAGAACTCGGCCTCCTATCTTCAGA
GGCTCCGACCTCGATTGGACCCGTCCTGATGGTCGTGGATTCCACCAATGCCGACCTGCCTTACTTCAAACGGGTGCTGTGAGTGC
TGCTTCTGGTTCTGCTTATGCTGAGTTTGGGAACACCAAAGTCATTGTTTCTGTATTTGGGCCAAGGGAGAGTAAGAAAGCAACGA
GTTATAGTGATGTTGGTAGATTGAACTGCAATGTTAGCTACACTACTTTTGCTTCCCCGACCCTTGGTATTCAGGGGACTGATCAC
AAAGAGTACTCATCAATGCTTCACAAAGCGTTGGAAGGCGTAATCATGATGGAGACGTTTCCAAAGACAACCGTTGATGTTTTTGC
GCTGGTGCTTGAGTCTGGAGGCAGTGACCTCCCGGTTGTGATATCGTGTGCTGGTCTTGCTCTAGCAGACGCCGGGATTATGATGT
ATGACCTTATCACAGCTGTCTCAGTGTCTTGCATAGGAAAAAGCCTTATGATTGACCCGGTTACAGAAGAGGAAGGATGTGAAGAT
GGAAGCTTCATGATGACGTGCATACCTTCTCGGAGTGAAGTCACTCAGCTGACCATCACTGGTGAATGGACAACGCCTAACATTAA
CGAGGCAACGCAGCTTTGCGTGGATGCTTGTTCCAAACTTGGAGAAATCATGCGCGATTGTTTGAAACAGGCTGTTTCAGCTTCAG
ATGAATGAACATACAACTCAAGAAACTATAGCGATGATTGTACCTCAGCCACTGGTATGAAACCGGTTAAGCTGTTGGGTTAGGTA
AAATTGAATTTATACTAAACTGGTGTGATGGAGTTCAAAACAGATGTACTGTGCTACGTCAAATTTTGATGGAACTAGATCTTTAA
AGAGCGTCATTTGCTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_194479 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] | 1185 | 1e-127 |
| XP_002869560 hypothetical protein ARALYDRAFT_492045 [Arabidopsis lyrata subsp. lyrata] | 1185 | 1e-127 |
| XP_002314284 predicted protein [Populus trichocarpa] | 973 | 4e-103 |
| XP_002285257 PREDICTED: hypothetical protein [Vitis vinifera] | 972 | 5e-103 |
| ABK96391 unknown [Populus trichocarpa x Populus deltoides] | 969 | 1e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O26779 Probable exosome complex exonuclease 1 | 314 | 4e-028 |
| Q97BZ5 Probable exosome complex exonuclease 1 | 298 | 3e-026 |
| A3MUP1 Probable exosome complex exonuclease 1 | 294 | 9e-026 |
| A9A5C9 Probable exosome complex exonuclease 1 | 291 | 2e-025 |
| A0RXU1 Probable exosome complex exonuclease 1 | 290 | 3e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A2RVK7 At4g27490 | 1185 | 7e-128 |
| B9HQC2 Predicted protein | 973 | 3e-103 |
| A5BI33 Putative uncharacterized protein | 972 | 4e-103 |
| A9PJ38 Putative uncharacterized protein | 969 | 8e-103 |
| B9MZ65 Predicted protein | 968 | 1e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G27490.1 3' exoribonuclease family domain 1-containing protein | 1186 | 3e-130 |
| AT3G61620.1 RRP41; 3'-5'-exoribonuclease/ RNA binding | 264 | 3e-023 |
| AT3G61620.2 RRP41; 3'-5'-exoribonuclease/ RNA binding | 264 | 3e-023 |
| AT3G46210.1 3' exoribonuclease family domain 1-containing protein | 179 | 2e-013 |
| AT3G46210.2 3' exoribonuclease family domain 1-containing protein | 179 | 2e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Software error:
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For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
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