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Information for unigene UN08550
| FASTA Sequence |
| Unigene ID: UN08550 | Length: 964 |
SSR | | GGATAATCACGTCACTGGACTTCTTGACGCACCTGAGCTCATTCAGCCTCCCAAGATTCTCGTCATCGAAGGTCTTCATCCAATGT
TTGATGAGAGAGTAAGAGACCTGTTGGACTTCAGTATCTACCTAGACATTAGCAATGAGGTCAAATTTGCTTGGAAAATCCAGAGG
GACATGGCTGAGAGAGGTCACAGTTTAGAGAGCATCAAAGCGAGTATCGAAGCACGAAAGCCCGATTTCGATGCATTCATCGACCC
GCAAAAGCAGTACGCGGATGCGGTAATAGAAGTGCTTCCAACGCAGTTGATTCCAGATGACAATGAAGGCAAAGTGTTGAGAGTGA
GGCTGATAATGAAGGAAGGTGTTAAGTACTTCAGCCCGGTTTACCTATTCGATGAAGGTTCTACCATCTCGTGGATCCCTTGTGGT
CGCAAACTCACCTGCTCGTACCCTGGCATCAAGTTCAACTACCAACCTGATTCCTACTTCGACAATGAGGTTTCGGTTGTGGAGAT
GGATGGGCAATTCGATAGACTTGACGAGCTAATATACGTGGAGAGCCATCTGAGCAACCTCTCGACCAAATTCTACGGTGAAGTGA
CTCAACAAATGCTCAAACATGCTGACTTCCCTGGTAGCAACAATGGAACTGGTCTTTTCCAGACCATTGTTGGATTGAAGATTAGA
GATCTCTATGAGCAGCTCATTGCCAACAAAGCCACTGCTCCTTCAGAAGCTGCTAAAGCCTAAAGCAAATATAAGCAAAACAGAAC
GCGTCGATAAACCCATTGGTTGTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTGTTTCCCGCGGATT
TTCATGGCGAAAAGGACGGTGTTGCTTGTTTTGTAATTTGTGTGGAGATATAAAAAGAAAAGCCCGTAATGTAGAGAATTTATTAG
CAGAGCAAAAGTTTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_174486 phosphoribulokinase [Arabidopsis thaliana] | 1242 | 2e-134 |
| XP_002890967 hypothetical protein ARALYDRAFT_890765 [Arabidopsis lyrata subsp. lyrata] | 1242 | 2e-134 |
| NP_001149223 LOC100282845 [Zea mays] | 1197 | 4e-129 |
| XP_002326572 predicted protein [Populus trichocarpa] | 1196 | 5e-129 |
| BAJ98572 predicted protein [Hordeum vulgare subsp. vulgare] | 1196 | 5e-129 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25697 Phosphoribulokinase, chloroplastic | 1242 | 1e-135 |
| P26302 Phosphoribulokinase, chloroplastic | 1191 | 8e-130 |
| P27774 Phosphoribulokinase, chloroplastic | 1186 | 3e-129 |
| P09559 Phosphoribulokinase, chloroplastic | 1140 | 7e-124 |
| P19824 Phosphoribulokinase, chloroplastic | 976 | 7e-105 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B4FQ59 Phosphoribulokinase | 1197 | 3e-129 |
| B9MUA4 Phosphoribulokinase | 1196 | 3e-129 |
| Q6Z8F4 Phosphoribulokinase | 1194 | 6e-129 |
| Q8GRU9 Phosphoribulokinase | 1194 | 6e-129 |
| A9PGT2 Phosphoribulokinase | 1186 | 5e-128 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G32060.1 PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding | 1242 | 9e-137 |
| AT3G27440.1 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative | 163 | 1e-011 |
| AT3G27190.1 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative | 159 | 3e-011 |
| AT1G55810.1 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative | 152 | 2e-010 |
| AT1G55810.3 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative | 152 | 2e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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