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Information for unigene UN09001
| FASTA Sequence |
| Unigene ID: UN09001 | Length: 1370 |
SSR | | ACTCTCTCTCTCTCTCTACCCTGAGTAAAAGAAAAGTAAACCAGCCACGTTTTTGTTGCTTTCAATACGAATCACAGATTTGGATC
TCTCATCTCTCTCCCTGCATCCATGGAGTCGGATAATAGTAGCGCCGGTTTCAGCTACTTGGGTCGCAATTTCAGCAATTTGAGTG
TCAACGATCACTCCTCTGCTTTCAGCGACTGTAACAGCGACAGATCCGGCGAATTCCCCTCCGCTTCCTCCGAGAGCCGCCGCCTC
CTCCTCTCCTGCGCCTCCGACGATCTCATCCGTCACCTCGTCGCTCATCTCGATTCTTCCTCTTCCGTCGAAGAGCAGAAGCAAGC
TGCGATGGAGATCAGGCTCTTGTCCAAGAACAAACCCGAGAATCGCATCAAAATCGCCAGAGCCGGAGCCGTTAAGCCTCTCATCT
CTCTCATCTCCTCTTCTGATCCTCAGCTCCAGGAGTACGGAGTCACTGCGATCCTGAATCTCTCCCTATGCGACGAGAACAAAGAC
CTGATCGCTTCCTCCGGCGCAATCAAGCCCCTCGTTAGAGCGTTGAAGATGGGAACTCCCACGGCTAAGGAGAACGCCGCCTGCGC
TCTCCTCCGGCTATCGCAAGTGGAGGATAACAAAGTCGCCATCGGAAGATCAGGTGCGATTCCTCTCCTTGTCAACCTTCTAGAAA
CAGGAGGAATCCGGGCCAAGAAGGACGCCTCCACGGCTCTCTACTCCCTCTGCTCTGCTAAAGAGAACAAACTCAGAGCCGTGCAC
TCTGGAATCATGAAGCCTCTCGTCGAATTGATGGCTGATTTCGGATCCAACATGGTCGACAAATCGGCCTTCGTCATGAGCCTGCT
CATGTCTCTGCCGGAATCTAAGCCGGCGCTCGTGGAGGAAGGAGGAGTCCCGGTGCTGGTGGAGATCGTGGAGGCGGGAACGCAGA
GGCAGAAAGAGATAGCTGTGTCGATTCTGCTTCAGCTCTGTGAGGAGAGTGTGGTGTATCGAACCATGGTGGCGAGGGAAGGAGCG
ATTCCTCCGCTTGTGGCACTTACTCAGGCAGGAACAAGTCGAGCTAAGCAAAAGGCGGAGGCTTTGATTGACTTCTTAAGGCAGCC
TAGATCTGTTAACAGTAACGGTGGAAGATGATTCAACAACCTTCTTTCTTCTTTCCTTTTGTTTTTTTTCTTTACACTGTTAATGC
TAAAGATACTTACACAGATGACAAACAATCAGACAGGGTAAGAAACTGTATATAGTTTTGTGCTCTAATATGTATAAAGTTAGCTT
TGCTTTGCCTCTGTAATCTAATATCTTCTTGCGTTTGGCTCTTTATTTTTCCTGTCGATTAATTTCATTTTGGTTTTAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566136 armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] | 1504 | 2e-164 |
| AAM64910 unknown [Arabidopsis thaliana] | 1501 | 3e-164 |
| AAL16172 AT3g01400/T13O15_4 [Arabidopsis thaliana] | 1494 | 2e-163 |
| XP_002510099 E3 ubiquitin ligase PUB14, putative [Ricinus communis] | 1325 | 9e-144 |
| BAC43497 unknown protein [Arabidopsis thaliana] | 1312 | 3e-142 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22193 U-box domain-containing protein 4 | 614 | 1e-062 |
| Q5XEZ8 U-box domain-containing protein 2 | 600 | 4e-061 |
| Q8GWV5 U-box domain-containing protein 3 | 588 | 1e-059 |
| Q8VZ40 U-box domain-containing protein 14 | 580 | 9e-059 |
| Q9C9A6 U-box domain-containing protein 10 | 556 | 6e-056 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SGH8 T13O15.4 protein | 1504 | 1e-164 |
| Q8LB86 Putative uncharacterized protein | 1501 | 2e-164 |
| Q944I3 AT3g01400/T13O15_4 | 1494 | 2e-163 |
| B9R706 E3 ubiquitin ligase PUB14, putative | 1325 | 6e-144 |
| Q8GWD6 Putative uncharacterized protein At5g58680/mzn1_130 | 1312 | 2e-142 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G01400.1 armadillo/beta-catenin repeat family protein | 1504 | 6e-167 |
| AT5G58680.1 armadillo/beta-catenin repeat family protein | 1312 | 1e-144 |
| AT4G16490.1 binding | 696 | 3e-073 |
| AT2G23140.1 binding / ubiquitin-protein ligase | 643 | 4e-067 |
| AT5G67340.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein | 600 | 4e-062 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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