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Information for unigene UN11971
| FASTA Sequence |
| Unigene ID: UN11971 | Length: 899 |
SSR | | CCAATACAATACACTTCATTTTATTTTACTTTTTGAAAGAATTTTTCCCAATACAGTACAAATACAAATACAAATACAAATAGTGC
GGTGTGTGTGTGACCCATAATAAGGAGTATACATATAACAACAATAAGCATACACCCACCATGTTGCATCATCGGTGAAGATGCTA
CACTAGGACACATAATAGGATCTTCTTCTTCTTCTTTTTTGGCTCATCAAACATAGTAAACCATGCCAACTTCAACGAGGCTAATG
TGAGGTATGTTGAGTGCTACCGCTGGCCCTCTGCAGTTCTTCCTCAGAAACGAGTACCCTATATCTATTATCATCTTCTTCACCCA
CGTCGATGATTTCCTTGCTTTCACATACGAATGTCCCATTACATATGCAACCCCTGCCTCTTTCGCCCCTATCAAATCCATTAGCT
CTTCCCTCACAGACGCCTCCATCCCGCGACTACTTGCCTCCGTTAACCCAAACGTCACCCTCCTTCTCCTCACTTGCCCCTCCTGA
TACTCTTCCTCGTAAACTGGCCTCAAACTCTGCAAGGTCATCGATTTGCTGCTTTGTCTCCCCGTCTCATCATTCTCCTCTACTTC
TGAAACCGTCAGGATTGAGTTTGACAGACTCTTGTCGCTACTTAACACCGCCATTCTCCCATCATATGATTGGTGGGACTCAGATG
CCGAAGATTGGACGTCCCCTGCTTCCATCTGGATGAACTCCGCTATGCTCTGTATCAACTGATTCTCAAAGTCCCCGTCCTCCCGT
TGAATGTCTTTGTACCCATACCTCACTATGCACCTGTACATACGATACGGCTTTGGGCATACACGCCCAACTAGGAAGCGTTCTTC
AGATATACATGTGGCACTGGCACTGATTTCACACAAACA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884247 hypothetical protein ARALYDRAFT_477306 [Arabidopsis lyrata subsp. lyrata] | 889 | 2e-093 |
| NP_186854 Potassium transporter 4 [Arabidopsis thaliana] | 887 | 3e-093 |
| AAF19432 potassium transporter KUP3p [Arabidopsis thaliana] | 870 | 3e-091 |
| XP_002512807 Potassium transporter, putative [Ricinus communis] | 706 | 3e-072 |
| XP_002277453 PREDICTED: hypothetical protein [Vitis vinifera] | 702 | 8e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LD18 Potassium transporter 4 | 887 | 1e-094 |
| Q8H3P9 Potassium transporter 7 | 578 | 9e-059 |
| Q942X8 Probable potassium transporter 2 | 549 | 2e-055 |
| Q5ZC87 Probable potassium transporter 3 | 493 | 6e-049 |
| Q9FE38 Potassium transporter 3 | 477 | 4e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RGU8 Potassium transporter, putative | 706 | 2e-072 |
| B9IA73 Predicted protein | 696 | 3e-071 |
| B9GNF7 Predicted protein | 684 | 7e-070 |
| C5XH54 Putative uncharacterized protein Sb03g045180 | 585 | 2e-058 |
| Q1T721 Potassium transporter | 581 | 6e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02050.1 KUP3 (K+ UPTAKE TRANSPORTER 3); potassium ion transmembrane transporter | 888 | 9e-096 |
| AT4G23640.1 TRH1 (TINY ROOT HAIR 1); potassium ion transmembrane transporter | 478 | 3e-048 |
| AT2G40540.1 KT2 (POTASSIUM TRANSPORTER 2); potassium ion transmembrane transporter | 401 | 3e-039 |
| AT2G40540.2 KT2 (POTASSIUM TRANSPORTER 2); potassium ion transmembrane transporter | 401 | 3e-039 |
| AT2G30070.1 ATKT1 (POTASSIUM TRANSPORTER 1); potassium ion transmembrane transporter | 240 | 1e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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