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Information for unigene UN13781
| FASTA Sequence |
| Unigene ID: UN13781 | Length: 1236 |
SSR | | GAATATCTTACAAACTGTCTTCTGAAGATCAACGCAAAGTTGGGAGGGTTGAACTCCTTGTAAGCGTTGAGCGAACTCCGGCCTTC
ACGGTCACCTCCAAGGTTCCAACCATCATCCTTGGAATGGATGTTTCGCATGGATCTCCTGGACAGTCTGATGTCCCCTCCATTGC
TGCTGTGGTGAGTTCTAGGCAGTGGCCTCTAATCTCCAAGTACAGAGCATCTGTTCGCACTCAGCCTTCGAAGGCTGAGATGATTG
AGTCACTCGTCAAGAAAAATGGAACTGAAGACGATGGCATCATCAAGGAGTTACTGGTAGATTTCTATGCCAGCTCTGGTAAGAGA
AAGCCTGAGCATATCATAATCTTCAGGGATGGTGTTAGTGAATCTCAGTTCAACCAGGTTCTGAACATTGAACTCGACCAGATCAT
AGAGGCATGCAAGCTTCTAGATGAGAATTGGAACCCGAAATTCCTCTTGCTGGCGGCTCAGAAGAATCACCACACCAAGTTTTTCC
AGACGAGCTCTCCCGACAACGTTCCCCCAGGGACAATAATCGACAGCAAAATCTGTCACCCGAAGAACAATGATTTCTATCTCTGT
GCGCACGCTGGAATGATTGGAACAACTCGTCCTACACATTACCATGTCTTGTATGATGAGATTAATTTCTCACCTGATGAACTCCA
AGAACTAGTCTACTCCCTCTCTTATGTGTACCAAAGAAGCACGACTGCCATTTCTGTTGTTGCACCGATCTGCTATGCTCACTTGG
CAGCTGCTCAGCTAGGAACGTTCATGAAGTTCGAAGATCAGTCAGAGACGTCCTCAAGCCATGGTGGCGTGACAGCTCCAGGACCT
GTCTCTGTTGCGCAGCTCCCAAAACTCAAAGACAACGTTGCCAACTCCATGTTCTTCTGTTAGGTCGAAGAAGCATCTTCTCTAAT
GTGCAGCAGCTGTCTGTTATCTCCAACTTGGCTCTCTCTTAGTAATTAAGTAGTAGTAATCGGCTTTCAAAACTTTCACCTTAGGA
TCATCTTTCTCGGTTTAAAGGCAACGAAACTAAAGGCTTGTTATGTTTTGTTTTCTGTGACTTTTCGCTAAGCCATGCTTGCCTGC
CTTTGGGGATTGAAATAATATGTTTTTACCCCTAAGGCCTTAACTCTCTCTCTCTATCAGGGATGTTTCTAGACGACTTATTGTAG
ATCTCTAAGCTTTAGCAAGTGATGCTTTTGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880875 hypothetical protein ARALYDRAFT_481584 [Arabidopsis lyrata subsp. lyrata] | 1449 | 3e-158 |
| NP_565633 argonaute 4 [Arabidopsis thaliana] | 1426 | 1e-155 |
| XP_002275928 PREDICTED: hypothetical protein [Vitis vinifera] | 1228 | 1e-132 |
| ABC61504 AGO4-1 [Nicotiana benthamiana] | 1222 | 7e-132 |
| ABC61505 AGO4-2 [Nicotiana benthamiana] | 1219 | 2e-131 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0JF58 Protein argonaute 4B | 1197 | 2e-130 |
| Q9SDG8 Protein argonaute 4A | 1166 | 9e-127 |
| Q6YSJ5 Protein argonaute 16 | 992 | 1e-106 |
| Q5NBN9 Protein argonaute 15 | 809 | 2e-085 |
| Q851R2 Protein argonaute MEL1 | 664 | 1e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZVD5 Argonaute (AGO1)-like protein | 1426 | 1e-155 |
| Q2LFC2 AGO4-1 (Fragment) | 1222 | 5e-132 |
| Q2LFC1 AGO4-2 (Fragment) | 1219 | 1e-131 |
| D5FQ91 Argonaute 4-like protein | 1216 | 2e-131 |
| B9SP45 Eukaryotic translation initiation factor 2c, putative | 1215 | 3e-131 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G27040.1 AGO4 (ARGONAUTE 4); nucleic acid binding | 1427 | 4e-158 |
| AT5G21150.1 PAZ domain-containing protein / piwi domain-containing protein | 1179 | 2e-129 |
| AT2G32940.1 AGO6 (ARGONAUTE 6); nucleic acid binding | 849 | 5e-091 |
| AT5G21030.1 PAZ domain-containing protein / piwi domain-containing protein | 615 | 6e-064 |
| AT1G69440.1 AGO7 (ARGONAUTE7); nucleic acid binding | 502 | 8e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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