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Information for unigene UN14299
| FASTA Sequence |
| Unigene ID: UN14299 | Length: 1668 |
SSR | SNP | GAATTTGATCGTTTGTTTCTTCGCCTTTCTCGTCCTTAGCTTTTTCTTCCCTCCTTAAATACCTACCTATACAGACAAATTTACTC
TGTTATCATCGAAAATTTTCTATTTTCTATTTTTTTCTTCGTTTTATTCCTCCTCCATATAACACAATCTTATCCCCATTGTTATC
AAGAAAACAAGGCGGGGAAAAAAAAAAAGCAATGGTTATGGCTATGGATCGGATCGCTTTTACCTCATCCCCATTCGCTTATCAAC
GTTCTTCTCATCCTCATGGCTACAGATCGTCTAGAGTTTTCATGTCTTCTACCATCCGTCCAGCCTCTACAGAGGTCACCAATGGA
AGGAAACCGCATCTCCCTCCACGTGAGGTCCATCTTCAAGTGAAATATTCAATGCCACCACAAAAGCTGGAGATCTTCAAGTCCTT
AGAAGGATGGGCTAACGACAACCTGCTGCCTTACCTAAAACCCGTCGAGAAATCATGGCAGCCAACTGATTTCCTCCCTGAACCTG
AGTCAGAAGGGTTCTATGACCAAGTCAAGGAGTTGAGAGAAAGGTGCAAAGAGCTTTCTGATGACTACTTTGTAGTGCTTGTTGGG
GATATGATCACAGAGGAAGCACTCCCAACTTACCAGACAATGATTAATACATTGGATGGGGTTAGAGATGAGACGGGAGCAAGTCC
TACTCCTTGGGCTGTGTGGACGAGGGCTTGGACTGCTGAAGAGAATAGGCATGGTGATCTTCTCAACAAGTATCTTTATCTCTCTG
GAAGAGTGGACATGAGGCAGATTGAAAAGACCATTCAATATCTGATTGGTTCTGGAATGGATCCAAAGACTGAGAATAACCCTTAC
TTGGGTTTCATCTACACTTCTTTTCAAGAGAGAGCTACCTTCATCTCTCATGGAAACACTGCTGGACTTGCAAAGAAGCTTGGGGA
CTCGAAGCTAGCGCAGATCTGCGGCACCATCGCTGCTGATGAGAAGCGTCATGAGACTGCTTACACCAAGATCGTAGAGAAGCTTT
TCGAGATCGATCCCGACACCACTGTCGTAGGCTTTGCTGACATGATGAGGAAAAAGATAGCCATGCCTGCTCATCTGATGTACGAT
GGCTCTGATGACAATCTGTTTGAGCACTTCTCCTCCGTGGCGCAGAGGCTTGGTGTCTACACTGCTAGGGACTATGCTGATATACT
GGAGTTTCTTGTCAGGCGGTGGAACGTGGAGAACTTGGCAGGTCTCTCTGATGATGGACACAAGGCCCAGGACTATCTCTGTAAAT
TGCCTGCTAGGATCCGCAAACTGGAAGAGAGGGCTCAAGGGAGAGGCAAAGACACTGCAAGAGACATACCTTTCAGCTGGATATTT
GGTCGAGAGATCAGGGCTTAAAAAGAAAAGTAGTATGATGCACAATCTCCTCACCATCACAATGATAAGGAGAGACTCTGTATTGG
AACATATGCTAGATAAAGTATGTGCGTTTTAGCCTTGTTTTGTTGGGATGATCACTATTGCTATTTTATTTATTTGTTTCAGTTTG
TATCCACTTCACTAATGTTTCTCTCTCTCTCACTTCCAACAGTTTGTAATTTTAAAAGATTGGGTTTGTACTGTGTTTTGAGATTG
TTAACAAGTTTCTTGATTATAAAAAAAATTGATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871710 hypothetical protein ARALYDRAFT_909604 [Arabidopsis lyrata subsp. lyrata] | 1849 | 2e-204 |
| XP_002882244 hypothetical protein ARALYDRAFT_477504 [Arabidopsis lyrata subsp. lyrata] | 1790 | 1e-197 |
| NP_186912 acyl-[acyl-carrier-protein] desaturase [Arabidopsis thaliana] | 1783 | 9e-197 |
| AAM20635 putative stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 1780 | 2e-196 |
| AAM64846 putative stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 1776 | 6e-196 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41319 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1581 | 1e-174 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1577 | 3e-174 |
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1575 | 5e-174 |
| P22243 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1532 | 5e-169 |
| Q42807 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1527 | 2e-168 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M879 Putative stearoyl-acyl carrier protein desaturase | 1783 | 6e-197 |
| Q8L468 Putative stearoyl-acyl carrier protein desaturase | 1780 | 1e-196 |
| Q8LBC6 Putative stearoyl-acyl carrier protein desaturase | 1776 | 4e-196 |
| Q8LA10 Stearoyl-acyl carrier protein desaturase | 1762 | 2e-194 |
| Q9LF04 AT5g16240/T21H19_160 | 1762 | 2e-194 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1784 | 2e-199 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1777 | 2e-198 |
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 1522 | 6e-169 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 1517 | 2e-168 |
| AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 1350 | 5e-149 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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