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Information for unigene UN16345
| FASTA Sequence |
| Unigene ID: UN16345 | Length: 875 |
SSR | | GGACGATAGGAGACCAAGTGGCTGTAATGGCACAAGTTTCTATGAGGAACTTTCAGTGCGTTGGATAGCCTGACACGAGAAAGCTG
ATCTTACCCGTTACTTACTTGTATATACAATCGCCGTTTAAGAATCTTTGGAAGCCCTTCTCTCTTTCCTTGAACACACACACACA
CACACGACACGCGTGAATACAATCTCCCATGGCTGCATTTGCAACAGCAGAAGCGTGTGACAGCAACGCAGAACTAATATCAAACG
GAGACCTACGAGCTCTCCAACCAATCTTCAAGATCTATGGCCAAAGAAGATGCTTCTCAGGGCCAGTCGTGACACTCAAGGTCTTT
GAAGACAACGTCCTAGTCAGAAACCAACTTGAGACAAAAGGAGAAGGCGCAGTCTTAGTTATAGACGGTGGTGGAAGCATGAGATG
CGCACTTGTTGGAGGAAACCTCGGACAGTTAGCTCAGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGTGG
ATGAGATCAATGACTGTGATGTTGGGGTTAGGGCGTTGGGTTCTAACCCGTTGAAGTCTAGTAAGAAAGGTCAGGGTGAGAAGAAT
GTGCCGGTTTATATTGGAGGGACTTTGATTAGAGATGGTGAATGGCTTTATGCTGATAGTGATGGTATCTTGATCTCCAAGACCGA
ACTCTCCGTCTGATCCAGAATGTTCTCATGCCTTAAGAGATTACTGTTGGAGCTGGTTTATGTGGAATTAGTAATATTCGGTTTAA
TATTCTCAAATGGAAACGTTTTTTGCAATTTGTGAAACTATATAATAATTACAAAATGTTATTATTTCTCTTGTTCGAAACGAGCT
AAAACCTTTATTTAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200437 Regulator of ribonuclease-like protein 3 [Arabidopsis thaliana] | 826 | 3e-086 |
| XP_002866134 dimethylmenaquinone methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | 821 | 1e-085 |
| XP_002529206 Regulator of ribonuclease activity A, putative [Ricinus communis] | 726 | 1e-074 |
| XP_002265968 PREDICTED: hypothetical protein [Vitis vinifera] | 697 | 3e-071 |
| CAN79693 hypothetical protein VITISV_040370 [Vitis vinifera] | 692 | 1e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FH13 Regulator of ribonuclease-like protein 3 | 826 | 1e-087 |
| Q9FFE0 Regulator of ribonuclease-like protein 2 | 616 | 3e-063 |
| Q9M8R9 Regulator of ribonuclease-like protein 1 | 608 | 3e-062 |
| Q46ZV6 Regulator of ribonuclease activity A | 519 | 6e-052 |
| B2SXN2 Regulator of ribonuclease activity A | 510 | 6e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9ST87 Regulator of ribonuclease activity A, putative | 726 | 9e-075 |
| A5C5H1 Putative uncharacterized protein | 692 | 8e-071 |
| B9N5J4 Predicted protein | 681 | 1e-069 |
| B6SMX7 Putative uncharacterized protein | 654 | 2e-066 |
| B6T0A4 Regulator of ribonuclease activity A | 653 | 3e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G56260.1 dimethylmenaquinone methyltransferase family protein | 827 | 1e-088 |
| AT5G16450.1 dimethylmenaquinone methyltransferase family protein | 617 | 2e-064 |
| AT5G16450.2 dimethylmenaquinone methyltransferase family protein | 617 | 2e-064 |
| AT3G02770.1 dimethylmenaquinone methyltransferase family protein | 609 | 2e-063 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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