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Information for unigene UN16493
| FASTA Sequence |
| Unigene ID: UN16493 | Length: 1378 |
| SNP | GGGGGCCTCACGAACCATTCTCAGACACTCAAAGACTTCAAATAAGACCTTCTCTTCAGTTTGCTCAGAGAGTGAACCAATAAGCA
TGGCGAAGATGATGATGATGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTCTCTGACTTTAATGGCGCCAAGCTC
AACCTACAAGTCCAGTACAAGAGGAAAGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGAAGATTCTTAT
AATGGGTGGCACTCGGTTCATTGGTATCTTCTTGTCCAGGCTCCTTGTCAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTA
AATCTCCTATTGCCAAACAATTGCCTGGCGAATCTGACCAAGACTTTGCTGATTTTTCTTCCAAGATTCTTCACTTGAAAGGAGAC
AGAAAGGACTATGACTTTGTGAAGTCAAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAACGGGAGGGAAGCTGAAGA
AGTTGAGCCCATAATAGAGGCACTTCCTAAACTAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGATGTCT
TGCCACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAAGGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGT
GTAAACTGGACTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTTGAAGAATGGTTCTTCCACCGTCTCAA
AGCTGGTCGACCTATCCCAGTTCCAAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAAGGACTTGGCAACAGCCTTTCTTG
CCGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATTCAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAAAGCT
TGCGCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCTAAAGAGTTCGACTTTGGGAAGAAGAAAGCCTTCCC
TTTCCGTGACCAGCATTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGAAACCAGAGTTCGACTTGGTGGATGGTC
TCACTGACTCATACAACCTCGACTTCGGTCGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCTAAGCAAG
AAGCTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTTGTGTGTTTGATCTCAAACTGAAGAAGATTCTCAAGTTTATCGT
CGTCTCAAATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAAGAGGCGCGCGGTCTGAATATTTTTTTCTACAAA
CC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33886 unnamed protein product [Thellungiella halophila] | 1926 | 2e-213 |
| NP_172405 RNA binding protein [Arabidopsis thaliana] | 1916 | 3e-212 |
| AAL32648 g5bf protein [Arabidopsis thaliana] | 1912 | 8e-212 |
| CAA71589 g5bf [Arabidopsis thaliana] | 1910 | 1e-211 |
| AAM65150 putative RNA-binding protein [Arabidopsis thaliana] | 1910 | 1e-211 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SA52 Uncharacterized protein At1g09340, chloroplastic | 1916 | 1e-213 |
| Q9LYA9 Uncharacterized protein At3g63140, chloroplastic | 515 | 3e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RFM2 NAD dependent epimerase/dehydratase, putative | 1715 | 4e-189 |
| A9PJN1 Putative uncharacterized protein | 1701 | 2e-187 |
| B9I6P3 Predicted protein | 1696 | 6e-187 |
| A9PGZ8 Putative uncharacterized protein | 1692 | 2e-186 |
| A5AIE0 Putative uncharacterized protein | 1689 | 4e-186 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G09340.1 CRB (CHLOROPLAST RNA BINDING); binding / catalytic/ coenzyme binding | 1917 | 8e-215 |
| AT3G63140.1 CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding | 515 | 3e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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