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Information for unigene UN16827
| FASTA Sequence |
| Unigene ID: UN16827 | Length: 1027 |
SSR | | GGGCGTAATCGATTTCAACAACTTGAACAGAAGAGAGAAGAAAGAGAGAGAGAGAGAGGGTAAAGGAAGGGAGAGTAACGAAGCCC
TAATTTAAATCTTCTCGTCTGATCTGAAAAGTTCCATTTACTCAAATTCTTTTTTTGGATTTCTCTCACATGGCGTTTCGAAAAAA
CTGTGGGCTGGAGCTCTTGGCAGCTTCTCTGACCCTAACCTTTGTTCTGATTAACCTGGTGGATGCGAACTCAGATGGAGATGCTC
TCTACGCTCTTCGACAGAGCTTGTCGGATCCCGACCATGTGCTCCAGAGCTGGGATCAGAATCTTGTTACTCCGTGCACCTGGTTC
CATGTCACCTGTAATCAAGACAACCGCGTCACTCGTGTGGATTTGGGTAATTCAAACCTTTCTGGACATCTTGCCCCTGAGCTTGG
GAAGCTCGAACATTTACAGTATCTGGAGCTCTACAAAAACAACATCCAAGGAACTATACCTTCTGAACTTGGAAAATTGAAAAGTC
TCATCAGCTTGGATCTTTACAACATCAATCTTACCGGGAAGATCCCTACTTTCCTTAGGGAAATTGAAGTCTCTGGTCTTTCTCCG
GCTCAATGACAACCGATTGACCGGTTCAATCCCTAGAGAACTAACGAAAATCCCAAGCCTTAAAGTCTTTGATGTGTCGAACAATA
ATTTGTGTGGAACTATCCCAATAGAAGGACCTTTTGAACACATTCCTTTGGAGAACTTTGAGAACAACTCGCGATTGGAGGGACCG
GAACTACTCGGTCTTGCAAGCTACGACACCAACTGCAACTGAGACAACTTTTTAAAAAATTGGGGGTGGATCTTGTAAGAACACTT
CACCACTTTTTATCAAATATCACATCTTTTACTTTGTAATAAGTATATATATGTCAGTAGTTGAAAAACAAAGAAAAAAGAGCCCA
AGACTACTGGTGTCTGTTTAAGTAAAACATATACATGCGTCTTTGTGTGTAGTGGCACTGAGAAGTAATAATGGTATTGGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197608 leucine-rich repeat-containing protein [Arabidopsis thaliana] | 596 | 2e-059 |
| NP_189960 leucine-rich repeat-containing protein [Arabidopsis thaliana] | 556 | 9e-055 |
| BAD44554 unnamed protein product [Arabidopsis thaliana] | 542 | 4e-053 |
| ACU19288 unknown [Glycine max] | 536 | 2e-052 |
| ACJ85954 unknown [Medicago truncatula] | 532 | 5e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 | 421 | 2e-040 |
| Q9XIC7 Somatic embryogenesis receptor kinase 2 | 404 | 2e-038 |
| Q94AG2 Somatic embryogenesis receptor kinase 1 | 397 | 1e-037 |
| Q9SKG5 Somatic embryogenesis receptor kinase 4 | 382 | 6e-036 |
| Q8LPS5 Somatic embryogenesis receptor kinase 5 | 353 | 1e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FPJ5 AT5G21090 protein | 596 | 1e-059 |
| Q6NQP4 At3g43740 | 556 | 6e-055 |
| Q67XM7 MRNA, complete cds, clone: RAFL25-33-L05 | 542 | 2e-053 |
| C6TBT6 Putative uncharacterized protein | 536 | 1e-052 |
| B7FMH1 Putative uncharacterized protein | 532 | 4e-052 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G21090.1 leucine-rich repeat protein, putative | 596 | 8e-062 |
| AT3G43740.1 leucine-rich repeat family protein | 556 | 3e-057 |
| AT4G33430.1 BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase/ protein binding / protein heterodimerization/ protein serine/threonine kinase | 421 | 2e-041 |
| AT1G34210.1 SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2); kinase | 404 | 1e-039 |
| AT1G71830.1 SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase/ transmembrane receptor protein serine/threonine kinase | 397 | 9e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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