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Information for unigene UN17322
| FASTA Sequence |
| Unigene ID: UN17322 | Length: 986 |
SSR | | CTGCATCTTCCATCAAATAACAAAATTTCAGTATCCATATCTCATCTCATACTTATTATTACTTCTGCTCTGACAACTGAGTTCAC
CAGGGAAAATACAAAACCCGGAATGTGTTTGTATCCGTAATACCTGTCTTTTGTTTTTATTGTTTGGGGGTAAGGAACAAGAACAA
TTTTATTGGATGTCAAAAGAAGAGAGAAAGAGGAATTTAGTTGTCGCCATAGATCCACTTCTCAGCGTTGTTGGTGTAAGAGACAA
GTTCTTGAGGCTTAAACCACAGATTGATCTCATCCTTCGCAGTCTCTGGTCCATCACTTCCATGGATTATGTTCCTCCCAACAACA
ACGGCAAGATCTCCACGGATTGTCCCAGGCTCAAATTTCTGAGGATCGGTGGCTCCAATCAGTTTACGCCCGTATCTGATCACACC
TTCTCCTTCCCATACCATGGCAATAACAGGACCAGAGCTAAGGAAGTCACACAAGCCATTGAAGAAAGGTCTTTCCTTGAGATCAT
GGTAATGCTTCTGTGCGAAATCCTTGGAAGGAACAACGACCTTGATACCAACAAGCTTGAAGCCCTTGCGTTCGAATCGAGAAATG
ATCTCTGATATCAGTCCTCGCTGCACTCCATCAGGCTTGATAGCAATGAAAGTGCGTTCCATCTCAGCAGCAAAAACCTCCTGATC
TTGAACCATGAAGGCTGCAGCAGGAAGAGCCAAGAGTCCAGTGATCCAAGTCTTTGAGGCGGCACCAGAACCTGATGATCTTCCAA
AGTTAGATGCATAGAGAGGCATCTTTCCAGATGCGGTAACCGCTGCTGCTGCACCAACGGCTCGTCCTTCAGAGAGAACGAGCATC
TAGCTGAGAGAGAGAGACTTGCTGCTTTCGAGCAGATCTGCAGATTGGGAGCTCATTTTTTCTTCTTTCTTGTTGGTTGAGAGAGT
GATGAATAAAAGCCGGAAGTGAAACTGAGAGGATACCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB86842 NDPK III [Brassica rapa] | 1056 | 8e-113 |
| AAY18431 putative nucleoside diphosphate kinase III [Noccaea caerulescens] | 1046 | 1e-111 |
| BAH20188 AT4G11010 [Arabidopsis thaliana] | 1044 | 2e-111 |
| NP_192839 nucleoside diphosphate kinase III [Arabidopsis thaliana] | 1039 | 8e-111 |
| XP_002874662 hypothetical protein ARALYDRAFT_489940 [Arabidopsis lyrata subsp. lyrata] | 1029 | 1e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O49203 Nucleoside diphosphate kinase III, chloroplastic/mitochondrial | 1039 | 4e-112 |
| Q8LAH8 Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial | 974 | 1e-104 |
| Q8RXA8 Nucleoside diphosphate kinase 4, chloroplastic | 882 | 6e-094 |
| P81766 Nucleoside diphosphate kinase 3 | 688 | 2e-071 |
| Q7V425 Nucleoside diphosphate kinase | 541 | 2e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8S945 Nucleoside diphosphate kinase | 1056 | 6e-113 |
| Q2KK37 Nucleoside diphosphate kinase | 1046 | 8e-112 |
| B9DHH1 Nucleoside diphosphate kinase | 1044 | 1e-111 |
| Q1ECR6 Nucleoside diphosphate kinase | 974 | 2e-103 |
| Q9LRJ2 Nucleoside diphosphate kinase (Fragment) | 945 | 4e-100 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G11010.1 NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3); ATP binding / nucleoside diphosphate kinase | 1040 | 2e-113 |
| AT4G23900.1 nucleoside diphosphate kinase 4 (NDK4) | 975 | 8e-106 |
| AT4G09320.1 NDPK1; ATP binding / nucleoside diphosphate kinase | 474 | 1e-047 |
| AT5G63310.1 NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2); ATP binding / nucleoside diphosphate kinase/ protein binding | 466 | 9e-047 |
| AT1G17410.1 nucleoside diphosphate kinase family protein | 193 | 4e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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