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Information for unigene UN17486
| FASTA Sequence |
| Unigene ID: UN17486 | Length: 750 |
| SNP | AATTTGCACCATCCATCCCTGAGAAGAACATCACTTGTTTGACAAGGCTTGACCACAACAGGGCCTTGGGTCAGATCTCTGAGAGG
TTGAGCGTGCCTGTCTCTGATGTTAAGAACGTGATCATCTGGGGTAACCACTCATCCACGCAGTACCCTGATGTCAACCACGCTAA
GGTGCAGACTTCGTCTGGAGAAAAGCCTGTCCGTGAGCTCGTCAAGAACGATGAGTGGTTGAATGGAGAGTTCATCACTACGGTTC
AGCAACGTGGAGCTGCAATCATCAAGGCCAGGAAGTTGTCTAGTGCACTTTCTGCTGCTAGCTCTGCATGTGACCACATCCGTGAC
TGGGTCCTTGGAACTCCAGAGGGGACATTTGTTTCCATGGGAGTATACTCAGATGGCTCTTACAACGTTCCATCAGGACTTATCTA
CTCCTTCCCTGTCACTTGCCGCAATGGAGAGTGGAGTATTGTCCAAGGGCTTCTGATCGATGAAGTATCAAGGAAGAAGATGGATT
TGACTGCAGAGGAGCTGAAGGAAGAGAAGGACTTGGCCTACTCATGCCTCTCTTAAACCAATACTCTTCTTCTCAGTCAGGTGTGA
GATCAACAAAGCTTTGAGGGCTTTGTTGAAATAAAGAGTGTGTTTAAAAGATCTCCCAAACACTGTCCCTGCGCTGATATTCATGT
ACTCCGTTTTTTCTTTGTGTCTGATTTGGTTTACCCATAGTAATAAAAAAACAACTTTTACT
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| GenBank top hits (Blast detail) | Score | e value |
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| BAJ34213 unnamed protein product [Thellungiella halophila] | 958 | 1e-101 |
| XP_002865429 cytosolic malate dehydrogenase [Arabidopsis lyrata subsp. lyrata] | 949 | 1e-100 |
| AAM65532 cytosolic malate dehydrogenase [Arabidopsis thaliana] | 942 | 9e-100 |
| XP_002892216 hypothetical protein ARALYDRAFT_470418 [Arabidopsis lyrata subsp. lyrata] | 942 | 9e-100 |
| NP_171936 malate dehydrogenase [Arabidopsis thaliana] | 937 | 3e-099 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93819 Malate dehydrogenase, cytoplasmic 1 | 937 | 2e-100 |
| P57106 Malate dehydrogenase, cytoplasmic 2 | 936 | 2e-100 |
| Q08062 Malate dehydrogenase, cytoplasmic | 878 | 1e-093 |
| O48905 Malate dehydrogenase, cytoplasmic | 874 | 3e-093 |
| Q7XDC8 Malate dehydrogenase, cytoplasmic | 856 | 4e-091 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LA78 Malate dehydrogenase | 942 | 6e-100 |
| B9DHX4 Malate dehydrogenase (Fragment) | 937 | 2e-099 |
| C5WYF2 Malate dehydrogenase | 886 | 2e-093 |
| B7FJQ4 Malate dehydrogenase | 883 | 4e-093 |
| B6SLL8 Malate dehydrogenase | 882 | 5e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G04410.1 malate dehydrogenase, cytosolic, putative | 938 | 1e-101 |
| AT5G43330.1 malate dehydrogenase, cytosolic, putative | 937 | 1e-101 |
| AT5G56720.1 malate dehydrogenase, cytosolic, putative | 746 | 2e-079 |
| AT5G58330.3 malate dehydrogenase (NADP), chloroplast, putative | 328 | 6e-031 |
| AT5G58330.2 malate dehydrogenase (NADP), chloroplast, putative | 328 | 6e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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