 |
Information for unigene UN19000
| FASTA Sequence |
| Unigene ID: UN19000 | Length: 999 |
SSR | | GGCACACAAACCCTTCTTCTCTCTTCCCATTTCTTCGCTTCAGAGAGAGAGAGAGAGAGAGATTCAAAAATGCTTCTCAAGTACGC
TTCTTCGCTCTCGCTCATGAACGTTCACGGAGTGAAGAAGGACATCTCTCCTCTCTTCTCCTCCGGGAAAAACCTCTCCTTCTCTG
TTCGCGCCTCCACGCAGCCACTAAGCGGCGTCGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTTCGAGT
CCGCAGATCTCTCTTGCTCGACATATGTACTCCCCTGAGTGCGAAGCCGCCGTGAATGAGCAGATCAATGTGGAATACAACGTGTC
TTATGTGTATCACGCTTTGTACGCTTACTTCGATCGTGACAACGTTGCTCTCAAAGGTCTTGCCAAGTTTTTCAAGGACTCGAGTG
TGGAAGAACGAGACCACGCTGAGATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAGCTACAGCCTATGGTGATGCCT
CAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTCTCTATGCCATGGAGTTGGCTCTATCATTGGAGAAACTGGTCAATGAAAA
ACTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGCCGATTTCATTGAGAGCGAGTTTTTGAACGAACAGG
TTGAAGCAATTAAGAAAATCTCGGAATACGTCTCTCAACTCAGAAGACTCGGCAAAGGACATGGGACATGGCATTTCGATCAGAAG
CTTCTCTAATAAACTGCTGCTGCTTAAGCTATTTTTGGTTGTATCTCTAATAAACTGCTGCTGCTGCTTAATCTATGGTTGTTGTA
CTCTCTTTAGAAACTGGTGTTGCTTAATCACTTTTGGCTGAGGGTATTTTTATGCATTTAGTTTTGTTTGCTCACAAACCTTTGAC
TAATAAGTTCATTTTACTTGAGGTGAAAGTTAATGTTAACCAAATTCATATCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001146869 ferritin-1 [Zea mays] | 1028 | 2e-109 |
| BAJ34006 unnamed protein product [Thellungiella halophila] | 1010 | 2e-107 |
| ABB22752 ferritin [Chorispora bungeana] | 986 | 1e-104 |
| XP_002878066 ATFER3 [Arabidopsis lyrata subsp. lyrata] | 979 | 7e-104 |
| NP_191168 ferritin 3 [Arabidopsis thaliana] | 967 | 2e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYN2 Ferritin-3, chloroplastic | 967 | 8e-104 |
| Q9S756 Ferritin-4, chloroplastic | 889 | 9e-095 |
| Q948P6 Ferritin-3, chloroplastic | 875 | 4e-093 |
| Q8H1T3 Ferritin-2, chloroplastic | 847 | 7e-090 |
| Q41709 Ferritin-2, chloroplastic | 843 | 2e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G56090.1 ATFER3 (ferritin 3); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 967 | 7e-105 |
| AT2G40300.1 ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 889 | 8e-096 |
| AT3G11050.1 ATFER2 (ferritin 2); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 831 | 4e-089 |
| AT5G01600.1 ATFER1; ferric iron binding / iron ion binding | 767 | 1e-081 |
| AT3G61010.1 glycosyl hydrolase family protein 85 | 193 | 4e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
