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Information for unigene UN21365
| FASTA Sequence |
| Unigene ID: UN21365 | Length: 649 |
SSR | | GGTGCAGCCGAGCAGGTATTGATAGGAAAGATCTCAACGGGTGCACAAAACGATCTAGAGAAAGTGACAAAGATGACATACGCGCA
AGTAGCCGTGTACGGTTTCAGCGACAAGGTCGGACTCCTCTCGTTTCCGCCGAGGGATGATGGATACGACTTCAACAAACCGTACA
GCAACAAGACGGGCGCGATCATAGACGAGGAAGTGGGGGAATGGGTGGGGAGAGCTTACGAGAAGACGGTGGAGCCGATAGAGACG
CACAAGGAGAAAGTGGCTGAGATCGCCGAGCTTTTGCTGGAGAAGGAAGTGCTGCATCAGGATGATCTTTTGAAAGTTTTGGGTGA
GCGTCCGTTTAAACCGGCCGAGGTTACTAACTATGACCGGTTCAAGTCTGGGTTTGAAGAGAGTGAGAAGGAAGAGTCCTCCACAA
CGACTGGTGCACCTGTGGTGGATGAAGGAGCTCCACCGCCGCTTGAGCCGCAGGTGGTTCCTACGTAGGAGAGTGAGTGAGTGAGT
GAGTTCCACCTGTTACGATTGTAAATTTTTTTATTAAGAATGCAATAAAACACAACTAAAACAAACAAAACAAACAAAAACAAGTC
TCTTTGTTTTTCAATGTTGGTTAGCAATGAATATTATTTTTGTTATG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002881027 hypothetical protein ARALYDRAFT_344684 [Arabidopsis lyrata subsp. lyrata] | 745 | 4e-077 |
| NP_850129 cell division protease ftsH-3 [Arabidopsis thaliana] | 741 | 1e-076 |
| AAC33234 putative AAA-type ATPase [Arabidopsis thaliana] | 741 | 1e-076 |
| AAL36270 putative AAA-type ATPase [Arabidopsis thaliana] | 736 | 5e-076 |
| BAE98430 AAA-type like ATPase [Arabidopsis thaliana] | 673 | 1e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84WU8 Cell division protease ftsH homolog 3, mitochondrial | 741 | 6e-078 |
| Q8VZI8 Cell division protease ftsH homolog 10, mitochondrial | 645 | 9e-067 |
| Q0DHL4 Cell division protease ftsH homolog 8, mitochondrial | 575 | 1e-058 |
| Q8S2A7 Cell division protease ftsH homolog 3, mitochondrial | 553 | 4e-056 |
| Q920A7 AFG3-like protein 1 | 279 | 2e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SYC0 Mitochondrial respiratory chain complexes assembly protein AFG3, putative | 621 | 7e-063 |
| B9IFV8 Predicted protein | 596 | 6e-060 |
| Q94ES0 AAA-metalloprotease FtsH | 581 | 3e-058 |
| C5YZ91 Putative uncharacterized protein Sb09g022490 | 579 | 5e-058 |
| B8AYZ7 Putative uncharacterized protein | 575 | 2e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G29080.1 ftsh3 (FtsH protease 3); ATP-dependent peptidase/ ATPase | 742 | 5e-079 |
| AT1G07510.1 ftsh10 (FtsH protease 10); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding / zinc ion binding | 646 | 6e-068 |
| AT1G06430.1 FTSH8; ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | 116 | 2e-006 |
| AT5G15250.1 FTSH6 (FTSH PROTEASE 6); ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion binding | 116 | 2e-006 |
| AT2G30950.1 VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | 112 | 5e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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