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Information for unigene UN23182
| FASTA Sequence |
| Unigene ID: UN23182 | Length: 771 |
| SNP | TTTTTAGGGCTTCCATTGTAAAACAAGTTTCAGCGCGGCGGCGGAGCCATGGTTCTCAAGACTGAGCTTTGCCGATTCAGTGGACA
CAAGATTTACCCAGGCAGGGGTATCAGATTCATCAGATCTGACTCTCAGGTGTTTTTGTTCATTAACTCAAAATGTAAGCATTATT
TTCATAATAAGTTGAAGCCTTCCAAGCTTGCATGGACCACCATGTACCGTAAACAGCACAAGAAGGACGCTGCTCAAGAGGCTGTG
AAGAAGAGGAGACGTGCAACCAAGAAGCCCTACTCTAGGTCAATCGTTGGAGCTACTTTGGAGGTCATTCAGAAGAAGCGTGCAGA
GAAGCCTGAAGTTCGTGATGCAGCCAGAGAAGCTGCTTTACGTGACATTAAGGAGAGAATCAAGAAGACTAAAGACGAGAAGAAGG
CAAAGAAGGCCGAGTTTGCTTCCAAGCAACAAAAAATCAAGGGCAATATCCCCAAGGCTTCAGCCGCACCAAAGGCTGCCAAGTTG
GGTGGTGGCGGTGGCAGACGTTGAATAGATTATAGCCCCCTCTTATCATCTCTCTGCACTTATCTTTTTATTTGTTTCAATTTTTG
AAGTTTTTCACCTTATTGGTATTTGTGTACTCAAAAAGAGATTTTTATGGATTATGAATTTTATTTATGTTTGCTTATCTCATTTT
GTATTTTAATTTCAACCATCTATGAAATTGCCTGATCAGTTCATGGCGTGTACATGACTTTAATTTTCTTCAATAGCAATTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190870 60S ribosomal protein L24-2 [Arabidopsis thaliana] | 762 | 7e-079 |
| NP_565851 60S ribosomal protein L24-1 [Arabidopsis thaliana] | 760 | 1e-078 |
| XP_002881455 RPL24A [Arabidopsis lyrata subsp. lyrata] | 757 | 3e-078 |
| XP_002877898 hypothetical protein ARALYDRAFT_485677 [Arabidopsis lyrata subsp. lyrata] | 740 | 2e-076 |
| BAJ33856 unnamed protein product [Thellungiella halophila] | 737 | 5e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P38666 60S ribosomal protein L24-2 | 762 | 3e-080 |
| Q42347 60S ribosomal protein L24-1 | 760 | 5e-080 |
| O65743 60S ribosomal protein L24 | 701 | 4e-073 |
| Q9FUL4 60S ribosomal protein L24 | 664 | 7e-069 |
| P50888 60S ribosomal protein L24 | 655 | 8e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FN60 Putative uncharacterized protein | 712 | 3e-073 |
| A9PHF8 Predicted protein | 703 | 3e-072 |
| C6SVV1 Putative uncharacterized protein | 697 | 2e-071 |
| Q1SN35 Ribosomal protein L24E | 697 | 2e-071 |
| A9P8N0 Predicted protein | 691 | 8e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G53020.1 STV1 (SHORT VALVE1); structural constituent of ribosome | 763 | 2e-081 |
| AT2G36620.1 RPL24A (ribosomal protein L24); structural constituent of ribosome | 761 | 4e-081 |
| AT2G44860.1 60S ribosomal protein L24, putative | 187 | 1e-014 |
| AT2G44860.2 60S ribosomal protein L24, putative | 187 | 1e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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