 |
Information for unigene UN24328
| FASTA Sequence |
| Unigene ID: UN24328 | Length: 1472 |
SSR | | TCGGGCTATACGCAGGATTCCATATCCGTGTAAGTATTCAAAACAATGTGACCTGCTTTTGTATAGCAAGTAAATCGAACTTAAAA
CATATGTTGATGTTTCCAACCCGTCCTCGTACCAATGGCGTTGCCTCGCAATCAAGGATGTGTGATTGGAAAGGTCTTAGTTGCTG
TACTCAAGGCTGATGTATTTCTAGTCTCAATCATGACATCAGCAGTGTATCTTCTACGTACGTTTGTGAGAGGCACCCGAGCAGCC
AGTGAGTCATAGTGTTTCTCAAATGAATTATCAACGTGTTGGGATTCCGGGAAACCAGGAAGACCCTTGCAACTCAGCCAATAGAT
GTCCAACCACATCTGTAGCCTTTTCAGCACCGACACTAACAGGGCTTGATCCACCCACTGCAGCCGTCTTATCATCGCCAACGCAA
GCCGTTGCTGGATCGATCACAACATTAGTCAATGCAGCACCATCACTTACAGTTTCTGGTACACCGGCATCTGCATTCAGGAGTGC
AATCGCAGTACCTGTTGATTGCTTCCTTAGATGTATTTATATCCTTAGCTTGACATTCAGTTATTTTCTTTTATAAACGTATAGTT
TTCAGTATTATCAGTCTTCTTCTTCTTCTCCCCCTTCTTCACTTGCTTCATCATCACTCTCATCCTCCATCTCAACATCATCATCA
CCTTCATCTCCAAGAATCCACTGTTGAAGCTCATCTTCTTCTCCTTCCATGTGTTGTTGTTGTATGTCCGCAGAGTCCCAGTCGTC
CTCCCCATCAATCCCAAGCTCTTCTCCCCGGCAAGACACCTTCAAATTCGGCCGTCTCCTCCCCAAAGCATCCACGATATCTCTGT
TCACGCTTCCGGTGATCCCTAACCATTTGAGCCTCGGGAAGAAGGGTTTCTTCAGCCATTTGAACGAGAGCTGAGTGATGCCACCA
CAGTCGTAAAGATCCAACAAACACAAGCTGCTTCCAGGACACCCGTCTTCGTACACCCGCGTAGACGCGAGAGCCATGACCGAGGG
ATCACCTATCAGCCTGCACTCTCTCAGCTGGAGTCTCGTGATCGGAGCTCCTGATTTCGCCAGAGCGAAAACCGCAGCATCTGTCA
GGTTAGGGAGATTCGACACGTCGAGCTCGCGTAGCGCTAGCTTCGAGGTTCCATCGAATAAAACAGTCATGAAATTGTCTGTTAAG
TTTCTGCATCCTCTCACAGAGAGAGAAGCCAGAGACTCCCAAACTCCTTCTTTAAGGTAAGACAGCCCCGTGTCGCTCACGTCAGT
GCCATCAAGAAGCAAAACTTTAAGTTTCGTTAGCTGCGAGACGGCTCGCAACGCCTCGTCCCTTATGTTTCTGCACCCTCTCAGAT
CAAGACTCTCCAGGTTCAGATTCGACGCCAGATTTCGAACAGCGTGATCCGTGAGGAGGTGGCACCTCCTCAGGCTGACGTGGCTG
AGCCTCGTGC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565400 F-box/LRR-repeat protein 10 [Arabidopsis thaliana] | 1212 | 1e-130 |
| XP_002886091 F-box family protein [Arabidopsis lyrata subsp. lyrata] | 1198 | 5e-129 |
| XP_002529805 ubiquitin-protein ligase, putative [Ricinus communis] | 815 | 1e-084 |
| XP_002264823 PREDICTED: hypothetical protein [Vitis vinifera] | 811 | 4e-084 |
| XP_002278507 PREDICTED: hypothetical protein [Vitis vinifera] | 811 | 4e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SDA8 F-box/LRR-repeat protein 10 | 1212 | 5e-132 |
| Q17RH7 Putative protein TPRXL | 135 | 4e-007 |
| Q75A58 Antagonist of mitotic exit network protein 1 | 130 | 2e-006 |
| Q86K40 Putative uncharacterized protein DDB_G0277255 | 129 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SUY6 Ubiquitin-protein ligase, putative | 815 | 9e-085 |
| B9HR17 F-box family protein | 797 | 1e-082 |
| B9H1M4 Predicted protein | 773 | 7e-080 |
| C5WZ06 Putative uncharacterized protein Sb01g047960 | 667 | 1e-067 |
| A2XC70 Putative uncharacterized protein | 662 | 5e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
