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Information for unigene UN26728
| FASTA Sequence |
| Unigene ID: UN26728 | Length: 895 |
SSR | | GCAAACTGGTAATGTATTTATTAACTTGATGCCGAAGAAAGATTTTTCATTAGAAATTTGATTAATCAGAGAGACATACAGTTTAT
TTTTCTTGATTGCATGTCTAACTAAAATCCTTTTTGGTCAAACAAATGTATAAATATAGAGATAATCATAAATACTTGGTCTGTCT
TTACCCTTTTGGATCATGGCTATCACTCCAGGTCCTGACTGCCACTGCAACTGCCTGTTTCACTGATTCAGCATCCATGCTTTCAC
AATCATCATTATTTGGTGAACCAATGGCATGCAAGCTAAATGAGTCCATACATGAAACCCTAGCTTCAACAACCTCAAGTCCAAGA
TCATCAAAAGCTTCAAGAACACAAACCAACAAGCCTGCCTCATTCTTCCCTGACATTACCTTTATCATGAATCCCTTCTCTAGGGT
TTCCACTGTAACCATGGGTTCGGTATGATGACATAAATATTGCTCAGACGTGGTCTCATTGTTGATTTTTTCAACTTTCTGTTTAA
GCTTTTTAATATATTTGGATGCATCCACTATGATCGAGGTTTCACTTTCAGCATTAGAGTTAGTGATTGAACGAAGCAATTGAAAC
TTTTCACGAAGAGAGGAATCTCTCTTGTATTCCCTCGAAACCATCCTTCAAATTTTTAGCTTCTTCTCCTCCTCCTCCTCCCCTAC
GGTTTCTCTTCTATATATATAGTAAGAAAGATAAATTAGAGGTCAGAGTTTCTACAACGTTTATAAGATCCTCTCGTCTCTCACAT
GTCTGCCTTATAGTCTGATCTCTTCATCGCTAGAGAATGTGATACATACGGACAAATCCTTTGGTATCTCGTGAATTGCTTGATTG
CCTCTATGTCTTTTTTTTGTCACAATTGCCTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_191181 transcription regulator [Arabidopsis thaliana] | 605 | 1e-060 |
| XP_002876355 hypothetical protein ARALYDRAFT_486063 [Arabidopsis lyrata subsp. lyrata] | 603 | 2e-060 |
| XP_002879870 hypothetical protein ARALYDRAFT_483101 [Arabidopsis lyrata subsp. lyrata] | 512 | 9e-050 |
| NP_565932 uncharacterized protein [Arabidopsis thaliana] | 499 | 3e-048 |
| XP_002520825 DNA binding protein, putative [Ricinus communis] | 410 | 6e-038 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9LYM0 At3g56220 | 605 | 1e-060 |
| Q8RUZ5 Putative uncharacterized protein | 499 | 2e-048 |
| B9S4A6 DNA binding protein, putative | 410 | 4e-038 |
| C6SYM6 Putative uncharacterized protein | 410 | 4e-038 |
| B4UWA4 Putative uncharacterized protein | 370 | 2e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G56220.1 transcription regulator | 605 | 6e-063 |
| AT2G40435.1 EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transcription regulator (TAIR:AT3G56220.1); Has 165 Blast hits to 165 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 500 | 9e-051 |
| AT1G29270.1 unknown protein | 149 | 4e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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