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Information for unigene UN27787
| FASTA Sequence |
| Unigene ID: UN27787 | Length: 1192 |
SSR | | GGGATCCAACGAAAACGATTAATGTTTACAAATGGCTGTAATGAGTTTACTTCCAGATTCGTAACTGTTACTTGATTAAAACAAGA
TCTGAAGCTATTCAATCTGAATCAGATGACTGTGTTGTTCAAGTAAAGTTGGAAACAGTTAAGTTGCCGACATGTCGAACCGAGAG
AACGCCGACGAACTTTTGTCAGTTTCTGTGACGCCGTACCGAGAAGGCAATTGATCGTCGGGATTTTGATTAGCCTGAGAAAATAC
CGACAACATCTTCTCGGAACTTTCCGAGAAAACAAGCTCCTCGCAATTTTATTTTGTTTCCGACAACTTACCAACATTAATTTACG
ACAAATTACCCAAGAATTATGATTTGTAGTAAAGTTTTGAGAATTTTCCGACAAGAATCATATGTTCTCAGAAATTGATCAGAAAC
CCGTCGTAAAATTTCCGAGGAGAAAAGTCGTCGGTAAATTTCATCGGCGTTGACGTTGGTTTCTTGTAGTGCTCTTAAACCCTTCC
CTACTACTACACTCGTTGTGACCATCATTAAGACGATAATCACTATGATTAGCACTATGATCATCATCCACGTACTCATGACTTCC
ACGTTGTTGCTGTTGTTGATGATGGTGATGGTGATGACGATTCCCTCCCGCAGCTTCTAACGCATCCACCTGAGCACCAACCTCAG
CCGCTTTTCTCCTTATATACGCCGCCGACATATCCCCACCACCGTTTCCTCCCTCCACCGTAACGCCGGCTAAAAGCTCCGGGAAG
TTAAGCCGAGCGGACGGTCCTCGGAGATAGAACACCGCCGTGTCGTAAGCTCTAGCCGCCGCTTCAGGAGTAGAGTAAGAGCCAAG
CCATATCCTCGACCGTTTATTAGGCTCTCTGATCTCCGCCACCCACTTCCCCCACTTCCTCATCCTTATCCCTTTATACGGTTTCT
CTCTCTTCCTCGTCGCCCCCGCCGACGCAACCGTCGAAGTTGGAACAGCAGCCGCCACTTCCCTCGCTGTCTCCATATGGGTTTTC
GCCGGAGAGTCCAAAAATCAACGTGAGAATAAACTTTTTCACCGATCTAAAGACTTATAATCAACGAGAAGCTTTAGAGAAGAAGA
AGAAGATGTGAGTTTGACGGCGAAGCGATTACATGCGGAGGGAGATATGATGAACACGGGGCCAAGAAGAGTAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAC49776 AP2 domain containing protein RAP2.10 [Arabidopsis thaliana] | 778 | 2e-080 |
| XP_002866963 hypothetical protein ARALYDRAFT_912628 [Arabidopsis lyrata subsp. lyrata] | 709 | 2e-072 |
| NP_195408 ethylene-responsive transcription factor RAP2-10 [Arabidopsis thaliana] | 705 | 6e-072 |
| AAL15314 AT4g36900/C7A10_460 [Arabidopsis thaliana] | 699 | 3e-071 |
| NP_179915 ethylene-responsive transcription factor ERF008 [Arabidopsis thaliana] | 484 | 2e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SW63 Ethylene-responsive transcription factor RAP2-10 | 705 | 2e-073 |
| O22174 Ethylene-responsive transcription factor ERF008 | 484 | 1e-047 |
| Q9FH94 Ethylene-responsive transcription factor ERF010 | 425 | 7e-041 |
| Q9SNE1 Ethylene-responsive transcription factor ERF011 | 401 | 4e-038 |
| Q8W3M3 Ethylene-responsive transcription factor RAP2-9 | 371 | 1e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PAI2 AP2/ERF domain-containing transcription factor | 470 | 7e-045 |
| A9PL95 AP2/ERF domain-containing transcription factor | 469 | 9e-045 |
| C6TMR1 Putative uncharacterized protein | 455 | 4e-043 |
| B9R789 Dehydration-responsive element-binding protein 1B, putative | 430 | 3e-040 |
| B9T7X2 DNA binding protein, putative | 419 | 6e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G36900.1 RAP2.10 (related to AP2 10); DNA binding / transcription factor | 705 | 2e-074 |
| AT2G23340.1 AP2 domain-containing transcription factor, putative | 484 | 9e-049 |
| AT5G67190.1 AP2 domain-containing transcription factor, putative | 425 | 6e-042 |
| AT3G50260.1 CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1); DNA binding / transcription factor | 401 | 4e-039 |
| AT4G06746.1 RAP2.9 (related to AP2 9); DNA binding / transcription factor | 371 | 1e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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