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Information for unigene UN34106
| FASTA Sequence |
| Unigene ID: UN34106 | Length: 1056 |
SSR | | GTTCTTTTAGAAAAAAACAATAAGCACACAAGAAAAATCAAACCATATTCAACTATGTACAATATAAGAAAGAAAGAACATTCTAT
CTCTGAGAAGAGAGACAACTGATACACTGAGAAAGAATAAACAACTGGAAGATGAAAAAAAAACCAAGGAAACTACTAATTGAATG
ACACAATGAAAAAAAAATCATATTCCAAACCTGTAATAAAAACCACGATTACTATAAAATCTTAAGCTTCAGCTTTTATCGGATTC
ACCGGTATACTTTTCGATTGAGTAACTTTGCAAGGGAAGTTAAAAGAAGGGCTGTTTCATTGTCTTTGTCTCTCCTTCTGTTCTTG
ATGTCTTGGAGCAAGTCCATTAGCTTCAGAGGTTCCCATGATCCGAACCCTTTTCACTGAAGTGACAAACATTCTCCATGGAACAT
CTCCAACAAGCATCCAGTCTCCTTTCTCATCTTCATAAGTGAGTACAAACTCTGCTGATCCATCTAAAAGTCTCAAAGGTTTCTTC
ACCTTTTCCCTACAAGTAGTAGAACCTGTCATTCCGAAGAACATTTCCTCAAGCGTCTGAGCCAAGTTTTCATAAGAAGAATGAGC
TCTAATGTCCACTTTTCTGCCTATGCCAACCCATCCATATTCACTTTTACATACCCTAAACCCTGAACATTCACCTTCATCGTGAC
GACATCTTTAGGCTCATCATTCTTTTCTTCTTCTTCAGCTTTGGTCCCCGCCTTCATAGCTTGGTGGTTGTTCACCTTGTTCATCC
TGTGTGACCCAATTGGTGGCCATCCCACTATCTGACTGCTTGAACGAGGAGGAGAAGCTCCTTGGTGAGGAAGAGTCAGCAGCTCG
TTTTGACGCAACTGAAGGAAAATCCTTAGCCGTTAGAATTCTCCCACGCTCTTTCCACGCGCCACCGCCGATGCTGAGCCCTAATC
CCAGCTCCAGCTCACTCTCAGCCGGAAGAAGAAGATTACTCTTCCCCCTCTCCATTTCCGACCCACGCATGTCGACAAAGATATCA
AAGAGAGAGAGAGAGAGTCTTTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_171949 auxin-responsive protein IAA12 [Arabidopsis thaliana] | 468 | 1e-044 |
| AAM65588 putative auxin-induced protein, IAA12 [Arabidopsis thaliana] | 468 | 1e-044 |
| XP_002889513 hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp. lyrata] | 468 | 1e-044 |
| BAJ34122 unnamed protein product [Thellungiella halophila] | 400 | 1e-036 |
| NP_850205 auxin-responsive protein IAA13 [Arabidopsis thaliana] | 389 | 2e-035 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38830 Auxin-responsive protein IAA12 | 468 | 6e-046 |
| Q38831 Auxin-responsive protein IAA13 | 389 | 9e-037 |
| A2XB18 Auxin-responsive protein IAA10 | 282 | 2e-024 |
| Q0DWF2 Auxin-responsive protein IAA10 | 282 | 2e-024 |
| Q38829 Auxin-responsive protein IAA11 | 260 | 8e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WU05 Auxin regulated protein | 389 | 1e-035 |
| B9SQS7 Auxin-responsive protein IAA13, putative | 367 | 5e-033 |
| A9PCE3 Putative uncharacterized protein | 348 | 8e-031 |
| B9HSU7 Predicted protein | 348 | 8e-031 |
| B9HKV4 Predicted protein | 343 | 3e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G04550.2 IAA12 (AUXIN-INDUCED PROTEIN 12); transcription factor/ transcription repressor | 468 | 6e-047 |
| AT2G33310.1 IAA13; transcription factor | 389 | 8e-038 |
| AT2G33310.2 IAA13; transcription factor | 389 | 8e-038 |
| AT2G33310.3 IAA13; transcription factor | 389 | 8e-038 |
| AT4G28640.1 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor | 260 | 7e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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