RadishBase

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Information for unigene UN41227

FASTA Sequence

Unigene ID: UN41227	Length: 908	SSR
GGAGACGAACAAACCGGTTATGGATTACACCGAGCTGGACGGCAAGTCTCCTTGGCTCTGCATCTGATATGGCTGATCATGGTGCT GCATTACAACTTGGAAGAGAAGTCGCATCACTACAGAGACGCGTCCCTAGCTCACATATTCATCATGAACAACATTCATTACATAG TTCAGAAGGTGAAAGGATCGCCGGAGCTGAGGGAAATGATCGGTGACCATTATCTGAGGAAACTCACGGGGATATTCAGACACGCG GCGACGAACTACCAGAGATCCACGTGGGTTAGAGTGCTGAATAGTTTGAGAGACGAAGGGTTGCACGTGAGTGGGAGTTTCTCATC CGGTGTGTCGAGAAGCGCGTTGAGAGAGAGGTTTAAAGCGTTCAACGCGATGTTCGAAGAGGTTCATAGGTCTCAGTCTACGTGGT CGGTTCCGGATGCTCAGCTTAGAGAGGAGCTGAGGATATCTTTGTCCGAGCATCTGATCCCGGCTTATAGATCGTTTCTTGGAAGG TTCAGGGGTCATATAGAGAGTGGGAGACACCCTGAGAACTACCTAAAGTATTCGGTTGAAGATATTGAGAGAATCGTTCTTGATTT CTTTGAAGGGTATGCACACTCGCCGAGCGTGAGGAGACGATGAGAAGAAGAAGAAGAAGACTGGAGAGGTGGTTACTTTCTCTCTT GTTTTTGTTTTGGTTTTGGTTCGTCAGCCACGTTAGGATGTTGTAGGATAGAAGAGCCATTCTTTGAATTTTTATTCACGGGTTGG TGGTTTTACGCTCACCGTTTCCTATTGTTGCCCCCCGATGGGATAATCTCCCAGGTATACCATACATTTGTGTTGTTGTTGTTGTG TCATATGTAATGCATACTCTCTTCTTTTAATCAAATTGTGATACGTGC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_001147016 protein binding protein [Zea mays]	994	1e-105
NP_566477 exocyst complex component 7 [Arabidopsis thaliana]	950	1e-100
AAL07238 unknown protein [Arabidopsis thaliana]	950	1e-100
XP_002885012 ATEXO70D3 [Arabidopsis lyrata subsp. lyrata]	941	2e-099
NP_175811 exocyst complex component 7 [Arabidopsis thaliana]	867	6e-091

Swiss-Prot top hits (Blast detail)	Score	e value
O35250 Exocyst complex component 7	211	3e-016
Q9UPT5 Exocyst complex component 7	208	7e-016
Q9VSJ8 Exocyst complex component 7	207	9e-016
O54922 Exocyst complex component 7	203	3e-015

TrEMBL top hits (Blast detail)	Score	e value
B6SJP4 Protein binding protein	994	8e-106
Q93ZZ6 Putative uncharacterized protein At3g14090 (Fragment)	950	1e-100
Q9LJH9 Gb\|AAD25781.1	950	1e-100
Q9SYG5 At1g54090	867	4e-091
B9GVY9 Predicted protein	846	1e-088

Arabidopsis top hits (Blast detail)	Score	e value
AT3G14090.1 ATEXO70D3 (exocyst subunit EXO70 family protein D3); protein binding	951	4e-103
AT1G54090.1 ATEXO70D2 (exocyst subunit EXO70 family protein D2); protein binding	867	2e-093
AT1G72470.1 ATEXO70D1 (exocyst subunit EXO70 family protein D1); protein binding	775	1e-082
AT5G50380.1 ATEXO70F1 (exocyst subunit EXO70 family protein F1); protein binding	491	1e-049
AT5G13150.1 ATEXO70C1 (exocyst subunit EXO70 family protein C1); protein binding	472	2e-047

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	3			100%

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