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Information for unigene UN42845
| FASTA Sequence |
| Unigene ID: UN42845 | Length: 567 |
SSR | | CAATAAAATCACTATCCGGTATAGATTTCCGATCCCTCGCCTCGACGACCTCCTGGACCAAATAGGCCGCGCTTCTATATTCACTA
AGTTGGATCTAAAAAGTGGATATCATCAGATTCGCATTCGTCCTGGTGATGAATGGAAAACGGCGTTTAAAACGCGTGAGGGTCTC
TTTGAGTGGTTGGTAATGCCTTTTGGCCTCTCCAATGCTCCTAGCACGTTTATGCGAGTGATGAATCAGGCTCTTAGGCCTTTTAT
TGGCAAGTTTGTGGTCGTCTACTTCGATGATATCCTCATCTTCAGTATGGACTTGCAAAGTCATCTGGAACATCTAACCGACGTTC
TTCTAGTGCCGCCGATGCTGTGGACGATGATGATGAGAACATCCACCGTCGCGAATGATTTTAAAGCAGTGATCCGGTTTCGTTTT
TTTGTGTTCACAATACAAAATATAATAAATAAATGAATACATATACACACACACACACAAAAAGATGTGGTGTGATAAACTAGTAA
TCAAGTTTCTGAAATATTTGCAGACTAATGTTGTCAATTTTTGGCATATAT
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| GenBank top hits (Blast detail) | Score | e value |
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| ABD63193 gag-pol polyprotein, putative [Asparagus officinalis] | 497 | 2e-048 |
| CAN79321 hypothetical protein VITISV_018984 [Vitis vinifera] | 475 | 6e-046 |
| XP_002279429 PREDICTED: hypothetical protein [Vitis vinifera] | 473 | 1e-045 |
| CAN68706 hypothetical protein VITISV_001642 [Vitis vinifera] | 472 | 1e-045 |
| CAN69233 hypothetical protein VITISV_003380 [Vitis vinifera] | 472 | 1e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 314 | 2e-028 |
| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 314 | 2e-028 |
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 307 | 1e-027 |
| P31843 RNA-directed DNA polymerase homolog | 306 | 1e-027 |
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 294 | 3e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9Z5 Gag-pol polyprotein, putative | 497 | 1e-048 |
| A5BU14 Putative uncharacterized protein | 475 | 4e-046 |
| A5AN84 Putative uncharacterized protein | 472 | 1e-045 |
| A5C6I7 Putative uncharacterized protein | 472 | 1e-045 |
| A5ACJ6 Putative uncharacterized protein | 470 | 2e-045 |
| Arabidopsis top hits | Score | e value |
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| No hits found | | |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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