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Information for unigene UN45338
| FASTA Sequence |
| Unigene ID: UN45338 | Length: 594 |
SSR | | GCGAACCCGCCTGAGCTCGGATCTTCCCCTCCTGCCCCACCCGGCTCATCATCACCAAACCCATCTCTTCCAATCACCTCCCCAAC
TCCTCCGGCGCCGATCGTAAACCCGAATTCGCCTCCGCCTCCGCCTCCGTCTAGTTTGAATCCTCCGCCGCAGTTTTCACCTCCTC
CGCCGGATTCGGATACAACCGCCGCACCTCCTCCGCCTGCATCGCAGTCAACAATCGCGCCGCCACCTCCAGCAGAAGAATCGGCG
TCACCGCCGCTAAATCCGCCGAGCTCCGTAGTGAATACTCCCGCGCCAGTGCATGCGAAAGCTGGTGAACGACTAAAGTAGAGACC
ATACATTCCAGTTCTTGAACTTGATTCGTTTGTTTGTTTGTTTGTTTTGATTAATTAGATCAAATGTTCTAATCTTTAAATCAAGG
TTAAACTGCATGTCCATACTTATTCCAATGGTCTAATCTTCGTGGAGTGTGAGTTGTCAAAACATCTTTATCATAGGTTTTATGAC
AGCAAATAAATTTTAATTTTGTTTCGATCTACAATTGTAAAGTTAAATTTTCCTCTCAAAATAAATTTTTATTGATTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885479 expressed protein [Arabidopsis lyrata subsp. lyrata] | 408 | 4e-038 |
| AAM64596 unknown [Arabidopsis thaliana] | 395 | 1e-036 |
| NP_566698 proline-rich family protein [Arabidopsis thaliana] | 379 | 1e-034 |
| BAC42165 unknown protein [Arabidopsis thaliana] | 319 | 9e-028 |
| XP_002954263 extracellular matrix glycoprotein pherophorin-V40 [Volvox carteri f. nagariensis] | 235 | 5e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P21997 Sulfated surface glycoprotein 185 | 211 | 2e-016 |
| Q9XIL9 Pollen-specific leucine-rich repeat extensin-like protein 3 | 209 | 3e-016 |
| Q6BSP4 Branchpoint-bridging protein | 205 | 8e-016 |
| Q9T0K5 Leucine-rich repeat extensin-like protein 3 | 200 | 3e-015 |
| Q9FLQ7 Formin-like protein 20 | 195 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LBR9 Putative uncharacterized protein | 395 | 1e-036 |
| Q9LRJ8 Genomic DNA, chromosome 3, P1 clone:MZN24 | 379 | 7e-035 |
| Q8GYN0 Putative uncharacterized protein At3g22070 | 319 | 6e-028 |
| Q3HTK5 Pherophorin-C2 protein | 233 | 6e-018 |
| Q3HTK6 Pherophorin-C1 protein | 229 | 2e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G22070.1 proline-rich family protein | 379 | 5e-037 |
| AT2G15880.1 leucine-rich repeat family protein / extensin family protein | 209 | 3e-017 |
| AT1G70460.1 protein kinase, putative | 204 | 1e-016 |
| AT4G13340.1 leucine-rich repeat family protein / extensin family protein | 200 | 3e-016 |
| AT1G61080.1 proline-rich family protein | 189 | 5e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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