 |
Information for unigene UN47945
| FASTA Sequence |
| Unigene ID: UN47945 | Length: 934 |
SSR | | GGTCTTGAGAAAATAAACCCTTGGCCATGGTGGTTGGTGGTCTTAGAGAGTTCGCGCTCAGAAGAAACGGAGATGGCACACCAGCT
CTGGACGAGTCTAACGGCGAGGAGCTTATGCACGTGCAGCCCTCAGTCGCCGTCGCTCTCGGCAACCGCTCCGTCGAGTCTCCCGG
AACTCTCTACATCACTTCCAGGAAATTGATTTGGCTGAGTGATGTAGACGTGGCGAAAGGCTATGCCGTGGATTTCTTGTCGATAT
CGCTTCACGCGGTTTCTAGAGATCCACAAACTTATTCATCTCCTTGTATTTATACTCAGATTGAAGTTGTAGAAGATGAGGATGAA
GATGGTGAGGATGATACAGAGTCCACTGGAGTGTTGGACTTGTCTAAGATCAGAGAGATGAGGCTTGTTCCTTCTGACTCTACTCA
GTTGGATACTCTGTTTGATGTGTTCTGCGAATGTGCTGAGCTCAATCCTGAACCAGTTGAAGAAGAAGAAGAAAGTGGACATAACT
GGGTGTTTAGTGCTGATCAGATGGTTGTTGGTGGAGGAGGGGAAGAAGATGCAGGATGGCAAATATCTCAGAGCCCGACGAGTGTA
ATTGGTCATTCCAATGGAGATGAAAGTATTGCTCAGCCTATGCTAGAGCTCCGGATCAATGATCAGAGGTTTGATGATGCTGAAGA
GATGGTTCATGAAAGTGAGAACAAAGATCACTAATTTGTTAAAACAATGTACTCTAAAACCCAGAGTTGTTTTTTATGTTTAAAAC
AGTGTTGTATCCGTCTTCTTTAATGTTTATGTACTTGGTTAAATATGAGTCGAGACAGATAGATTAAGCTCATCTGTTACCTCTCT
CATTAATCATTACTCGTTGAAGAACCAGACCGTTAATGAAAAAGTTTACGAAATAATAGCTCCTATGTTATTGT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001119478 nucleotide-sensitive chloride conductance regulator family protein [Arabidopsis thaliana] | 986 | 1e-104 |
| NP_201035 nucleotide-sensitive chloride conductance regulator family protein [Arabidopsis thaliana] | 977 | 1e-103 |
| XP_002864782 hypothetical protein ARALYDRAFT_496406 [Arabidopsis lyrata subsp. lyrata] | 957 | 2e-101 |
| XP_002510919 Methylosome subunit pICln, putative [Ricinus communis] | 776 | 2e-080 |
| CBJ19441 nucleotide-sensitive chloride conductance regulator [Citrus clementina] | 770 | 1e-079 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q61189 Methylosome subunit pICln | 208 | 7e-016 |
| Q04753 Methylosome subunit pICln | 206 | 1e-015 |
| P35521 Methylosome subunit pICln | 198 | 1e-014 |
| P54105 Methylosome subunit pICln | 198 | 1e-014 |
| Q5R719 Methylosome subunit pICln | 198 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3H4U0 Uncharacterized protein At5g62290.2 | 986 | 7e-105 |
| Q9LVA7 Genomic DNA, chromosome 5, P1 clone:MMI9 | 977 | 8e-104 |
| B9R9P4 Methylosome subunit pICln, putative | 776 | 2e-080 |
| D2U835 Nucleotide-sensitive chloride conductance regulator | 770 | 8e-080 |
| B9ICV4 Predicted protein | 755 | 4e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G62290.2 nucleotide-sensitive chloride conductance regulator (ICln) family protein | 987 | 3e-107 |
| AT5G62290.1 nucleotide-sensitive chloride conductance regulator (ICln) family protein | 978 | 3e-106 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
