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Information for unigene UN47973

FASTA Sequence
Unigene ID: UN47973Length: 671 SSR 
GGACTACTGACTGCACCTTCGTCGGAGGTATTCACTAAGCTAGAGATGGCTGAAACAGCGAGAAGACAAGGCGGTGGGAGGCCATT
GCCTCCTCCTCCGAGAGGCGTCAATCAACCTCCTCGCGTTAAATCCGAACCTGTCGATCGTGAGAAGACATGTCCCCTGCTTCTTC
GCGTTTTTACAAAGAGCGGTGGTCATCATACTAAGGAAGATTATGCTGTGAGAGGCAAAGAACCAAAGGATGAAGTTCAAATTTAC
ACTTGGAAAGATGCTAATCTTCGCGAGTTAACTGATTTGGTCAAAGAAGTCTCTGTTGCAGCTAGGAGAAGAGATGCAAGGTTGTC
TTTTGCGTTTGTTTATCCCGACAAGAATGGCCGTTTCTTTTGAGACAGGTTGGTCAGACTATGTCTTATCCGAACCGAAAACAGCC
AGACGACACTGAAACACTCGCTGACCTTCATTTCGAGATTGGAGATTATCTGGATGTAGCAATCTACTAGTAGGAGGTTTCTGTTT
CTCGTCAAGTGAAGAGATTTAGGTGTGTGTGTGTGTGTGGACAAGGGAAACAACTCATTCATGGTTGTTCCCAACTCAAAACTTCG
TTCAGACAACATTTTATGTCTAATATGTGGTGTAATGATTTTACTCAGTTTAAACGAGATTTGACCAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882023 hypothetical protein ARALYDRAFT_904009 [Arabidopsis lyrata subsp. lyrata]5412e-053
NP_566050 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]5261e-051
NP_001189753 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]5261e-051
AAM67239 sin3 associated polypeptide p18 [Arabidopsis thaliana]5206e-051
XP_002511764 Histone deacetylase complex subunit SAP18, putative [Ricinus communis]4508e-043

Swiss-Prot top hits (Blast detail)Scoree value
O64644 Histone deacetylase complex subunit SAP185266e-053
Q3T022 Histone deacetylase complex subunit SAP182327e-019
O00422 Histone deacetylase complex subunit SAP182327e-019
Q5RDT5 Histone deacetylase complex subunit SAP182327e-019
O55128 Histone deacetylase complex subunit SAP182319e-019

TrEMBL top hits (Blast detail)Scoree value
B9RDH5 Histone deacetylase complex subunit SAP18, putative4505e-043
C6T2R6 Putative uncharacterized protein4489e-043
B9GPT2 Histone deacetylase complex protein4211e-039
A2X0A2 Putative uncharacterized protein4067e-038
Q6ZH90 Os02g0122000 protein4067e-038

Arabidopsis top hits (Blast detail)Scoree value
AT2G45640.1 SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18); protein binding / transcription regulator5265e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information