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Information for unigene UN48723
| FASTA Sequence |
| Unigene ID: UN48723 | Length: 557 |
SSR | | GGAGACAACATCCAAACACACCTCTCGTTCACATCTTTTTTCTTTGTAGTGAACAGAAAGGCAGAGAGAGAGAGAGAGACCAGAGG
AGCATGGAGAAAGACCCTGAGAAAAAGAAGTACCCGGGAGGTGCATTTGACCCTCTTGGATACTCCAAAGATCCCAAGAAGTTTGA
GGAGTTGAAAGTTAAGGAGATCAAGAACGGGAGGCTTGCGTTGTTGGCCTTTGTAGGCTTCTGTGTGCAGCAATCGGCTTACCCAG
GGACAGGACCATTGGAGAACTTGGCTACTCACTTGGCTGATCCATGGCACAAAAACATTGGCGATATTGTTATCCCTCTGAACTAG
TGACTTGTAAAAAAAATGGTAGTAATGTGCCCTATGAGCTTCATGTGTATCAAAACTCTCTGTAATGAAAAGACAGATTGTGAAAC
CTATGATGTTTTGTCTTGGTGATCGACTGCTTCGTGTGAGCTTGAATTCTACGTGGTTTTACTATTTGTAATATCATGTTCCTGAT
GTTTCATTGAAACAATATTTAAAATCATTTAGATTGGTCAT
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| GenBank top hits (Blast detail) | Score | e value |
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| BAJ33962 unnamed protein product [Thellungiella halophila] | 468 | 4e-045 |
| NP_191049 light-harvesting complex I chlorophyll a/b binding protein 1 [Arabidopsis thaliana] | 453 | 2e-043 |
| AAG40043 AT3g54890 [Arabidopsis thaliana] | 453 | 2e-043 |
| BAH20219 AT3G54890 [Arabidopsis thaliana] | 453 | 2e-043 |
| XP_002878004 hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp. lyrata] | 453 | 2e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic | 439 | 5e-043 |
| P12360 Chlorophyll a-b binding protein 6A, chloroplastic | 421 | 6e-041 |
| P12330 Chlorophyll a-b binding protein 1, chloroplastic | 218 | 2e-017 |
| P27492 Chlorophyll a-b binding protein 16, chloroplastic | 217 | 3e-017 |
| P27493 Chlorophyll a-b binding protein 21, chloroplastic | 217 | 3e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DHK2 AT3G54890 protein (Fragment) | 453 | 2e-043 |
| Q01667 AT3g54890 | 453 | 2e-043 |
| Q9C5R7 AT3g54890 | 453 | 2e-043 |
| Q40512 Photosystem I light-harvesting chlorophyll a/b-binding protein | 444 | 2e-042 |
| B9HLM2 Light-harvesting complex I protein Lhca1 | 442 | 3e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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