Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN49397

FASTA Sequence
Unigene ID: UN49397Length: 801 SSR 
GGACGTGTCGGCTTACTCGCCACTCGCCCTCTCAGATTACATTTGAGTCAAGCTGCTGCTGATCTGTGTGATTCCAAAGCGGGTGC
TGAGCTTTTGGACATCATCCGTAGGAAGGAGGAGAATGGTACAATAGGGCAGTTACTACTACCTTCATCGCCACCGTACTTTCCCG
GTTCTCCCCCGAGCAGAGCAGCGAACCCGTTAGCCCAAGATGCACGCTTTCGTGACGGCGAGAAGCTCAACTACCCACTCGCTTCA
CCCAACTCTCCTTTCCTTCAGCCCGGTTCATCATCAACCGGCTTCCCTTATCCATCACCATCAACATCTTCGTCGTCGTCTCGTGG
TTGCGCTCGAATGAAATTTGGGCTCAAACCACCTGCAGTTAGAGTAGAAGGGTTCGATTGCTTGAACCGTGGCCGCCAGAGCTCCA
GCATCCCCGCCATGGCTTAGTAGACCAAAGCCAACAAAAAAAATAAGTGTATATAAAGAGAGATTCCGGAGTCGTTTCGTTCGTTC
ACAAAGGCCCTAACAGAGAGAGAAGGATTTGATTACTAGTGTTACTACTACATTTTTGAATCAAATGAATATGTGATATCTATTTA
GTGTTTTCTTTTTTTCATCTTCTCCTGAGAGAGAGAGAGGGAGGATGAAGATGAAGATCAGTCACCGTTTTGTTTATACATTAATA
ATTAAGGAGAAGATTAGAAGAAGAATCTGTAAAATTTTATCTTGGAAAAGAGGTCTGGTTTGTATCTTTTTCCTTTTGATTTCGTT
GTAATATAAAATTATCTTCTTTACACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568326 uncharacterized protein [Arabidopsis thaliana]5843e-058
AAG40362 AT5g16110 [Arabidopsis thaliana]5843e-058
BAF02167 hypothetical protein [Arabidopsis thaliana]5843e-058
XP_002873758 AT5g16110 [Arabidopsis lyrata subsp. lyrata]5754e-057
ADK13069 conserved hypothetical protein 12 [Hevea brasiliensis]3675e-033

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WL40 Putative uncharacterized protein At5g161105842e-058
Q9FPI4 AT5g161105842e-058
Q9LF17 Putative uncharacterized protein T21H19_305842e-058
B9S5F6 Putative uncharacterized protein2033e-014
C6T919 Putative uncharacterized protein1901e-012

Arabidopsis top hits (Blast detail)Scoree value
AT5G16110.1 unknown protein5851e-060
AT1G68490.1 unknown protein2184e-018
AT3G02555.1 unknown protein2122e-017
AT1G13390.1 unknown protein1271e-007
AT1G13390.2 unknown protein1271e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information