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Information for unigene UN80297
| FASTA Sequence |
| Unigene ID: UN80297 | Length: 550 |
SSR | | GGGTGTGCCTCTTGTTAAGCTCCACTTCCCCACTACTCTCTCTCTCTCTCTGCATCTCATCTCAGTTCGGTTGCACAATGTCGAAA
TCTGGCGCTATGGATCTCGCCTCCAACCTTGGTGGAAAGATTGATAAATCCGATGTTCTCTCCGCCGTCGAAAAGTATGAGCAATA
TCATGTCTTCCACGGCGGAGAAGAAGAAGAGAGGAAAGCTAATTACACTGACATGGTTAATAAGTATTATGACCTTGCTACTAGCT
TTTATGAGTACGGTTGGGGAGAGTCCTTCCATTTTGCGCACAGATGGAATGGAGAATCACTTCGAGAGAGTATCAAACGTCACGAG
CACTTTCTTGCTCTTCAGCTTGGCGTCAAACCTGGACAAAAGGTTTGCTTAAGCTCTCGAAATTAATGAACCCTTTCACCATCAAC
ATGCTCATTCATTTCCTCCTTTTGTATTTCTGAACAGGTACTGGATGTAGGATGTGGAATTGGTGGACCACTGAGAGAAATTGCAC
GATTCAGGTTAAAAGTGACTGACCACACATACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873624 cephalopod [Arabidopsis lyrata subsp. lyrata] | 510 | 5e-050 |
| NP_196875 cycloartenol-c-24-methyltransferase [Arabidopsis thaliana] | 503 | 3e-049 |
| AAM53553 cephalopod [Arabidopsis thaliana] | 503 | 3e-049 |
| AAZ83345 24-sterol C-methyltransferase [Gossypium hirsutum] | 492 | 6e-048 |
| XP_002517794 s-adenosyl-l-methionine:delta24-sterol-C-methyltransferase, putative [Ricinus communis] | 490 | 1e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LM02 Cycloartenol-C-24-methyltransferase | 503 | 2e-050 |
| Q6ZIX2 Cycloartenol-C-24-methyltransferase 1 | 483 | 4e-048 |
| O14321 Sterol 24-C-methyltransferase | 217 | 3e-017 |
| Q54I98 Probable cycloartenol-C-24-methyltransferase 1 | 215 | 4e-017 |
| Q6C2D9 Sterol 24-C-methyltransferase | 202 | 1e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2QDF7 24-sterol C-methyltransferase | 492 | 4e-048 |
| B9RVM5 S-adenosyl-l-methionine:delta24-sterol-C-methyltransferase, putative | 490 | 7e-048 |
| A2YJB1 Putative uncharacterized protein | 483 | 5e-047 |
| A3BHN4 Putative uncharacterized protein | 483 | 5e-047 |
| Q0D7V5 Os07g0206700 protein | 483 | 5e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13710.1 SMT1 (STEROL METHYLTRANSFERASE 1); sterol 24-C-methyltransferase | 503 | 2e-051 |
| AT5G13710.2 SMT1 (STEROL METHYLTRANSFERASE 1); sterol 24-C-methyltransferase | 503 | 2e-051 |
| AT1G20330.1 SMT2 (STEROL METHYLTRANSFERASE 2); S-adenosylmethionine-dependent methyltransferase | 156 | 3e-011 |
| AT1G76090.1 SMT3 (STEROL METHYLTRANSFERASE 3); S-adenosylmethionine-dependent methyltransferase/ sterol 24-C-methyltransferase | 153 | 7e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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